#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [927 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | H 1 (T) | polymer(polyribonucleotide) | RNA (43-MER) | 496N 500K 501S 507N 543N 545K 557V 559G 569R 577K 580A 590G 592S 594F 595Y 682S 683G 684D 685A 687T 689Y 857E 860V 864I 914R 915Y 924M (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7kro_A_1 identity=100.0% |
queryA 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 :****************************************************************************************************: 7kro_A_1 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 SecStr : SHHHHHHH SS EEEESSSSS EE EEE SS EEE EE S EEEEE GGG EEEEEEE B HHHHHHHHHHHHHSTT SSS EEEE: ExpBur :eeeebbeebbeeeebebeeeeeeeeeeebebbbbeeeeebbbbbbbebeebbbbbbeeeeeeeeebbbbbbbeeeebbeebeebbeebeebebbbebbbb: queryA 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 :****************************************************************************************************: 7kro_A_1 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 SecStr :EEESSSSEEEEEEE SB SSBHHHHHHHHHS TTS TTHHHHHHTTSS SSGGGSSSSS SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTEE: ExpBur :ebeeeeeeebbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbebeebeebbeebbeebbebbeebbebbebbeeebbe: queryA 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 :****************************************************************************************************: 7kro_A_1 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 SecStr :EE GGG BTTS SS EE STT EEE TTTTTTTTTHHHHTT SGGGTBGGG TTS B TT HHHHHHHHHHSSTT SS SSGGG : ExpBur :bbbbbbbbbbebbbbbbeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebe: queryA 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 :****************************************************************************************************: 7kro_A_1 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 SecStr :STTSHHHHHHHHHHHTTSS TTS EEEEEEEEETTEEEEEEEEEEETTTEEEE S TTB HHHHHHHHHSHHHHHHTSB SS SS EEEB S: ExpBur :ebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeebbebbbebbbbebeeeeeebebeebebebebbbe: queryA 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 :****************************************************************************************************: 7kro_A_1 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 SecStr :SS B B EE HHHHHHHHHTT S SS SS B B TBHHHHHHGGGGG TTTHHHHHHHHHHHT S GGG S SS : ExpBur :eeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeebeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebeebebebeebebeeeeeeb: Contact : b bb queryA 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 :****************************************************************************************************: 7kro_A_1 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 SecStr : HHHHTT HHHHHHHS SHHHHHHHHHTTSS EEEEEE S BSS S EEEEE HHHHHHHHHHHHHHHHHHTT SSSB SS STTTHHHHHH: ExpBur :bbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebebbbbbbbbbebbbbebbebbeeeeebbbbbebeeeeebbeebb: Contact : b b b b b b b b b b bb queryA 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 :****************************************************************************************************: 7kro_A_1 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 SecStr :HHHSSS SSEEEE TTTTTS HHHHHHHHHHTTSS SSSS HHHHHHHHHHHHHHTTS EEE SS EEE SS TTSSSSHHHHHHHHHHHHHHH: ExpBur :eebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebeebbbbbbbbbbbbbb: Contact : bbbb b b queryA 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 :****************************************************************************************************: 7kro_A_1 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 SecStr :HHHHHHTS SSS HHHHHHHHHHHHHHHS S HHHHHHHHHHHHHHS EEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHSSS GGGS EE: ExpBur :bbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebbee: queryA 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 :****************************************************************************************************: 7kro_A_1 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 SecStr :S STT S BTTEEEEEEEETTEEEEEEEE TTHHHHHHHEESSGGGGGSTT STTHHHHHHHHGGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbeebebbbebbbebbbbeebeeeeebebbebbbebbeebbeebeeeeeee: Contact : b b b queryA 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :***************************: 7kro_A_1 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :SSS SS SSTTSHHHHHHTTSS : ExpBur :eeeeeeeeebeebeeeeebeebbeeee: Contact : bb b |