#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | I 1 (N) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | J 1 (O) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 269D 270L 271L 272K 273Y 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 365R 368F 371L 380M 381H 383A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 403N 405V 407F 509W 514L 518S (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7egq_I_1 identity=100.0% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 :****************************************************************************************************: 7egq_I_1 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 SecStr : HHHHHHHTTTS EEEE SSSS EEEEEEEESSS EEEEEEEE EEEEEE GGG EEEEEEEEE HHHHHHHHHHHHHH STTB EEEEE: ExpBur :eeebeeebbeeeebebeeebeeeeeeebebbebeeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebebbe: queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 :****************************************************************************************************: 7egq_I_1 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 SecStr :E SSS EEEEEE S SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGGSSS S SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTEEE: ExpBur :eeeeeeeebbbbbbebbebbbbbbbbbbbebeeeebeebeebbeebebbeeebbeeeebbbbbebeebeebbeebbeebbebbeebbebbeebeeebbeb: queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 :****************************************************************************************************: 7egq_I_1 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 SecStr :E GGGBBTTS B SS EE STT EE SHHHHHHHHHHHHTTGGGGTTBTTS TTS B TT HHHHHHHHHHHHTT S SSGGG S: ExpBur :ebbbbbbbbebebbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbeeebbbebeebee: Contact : bbbbb queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 :****************************************************************************************************: 7egq_I_1 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 SecStr :HHHHHHHHHHHHHHTTSS GGG S EEE EETTEE EEEEEE SSS EEE S SSBS HHHHHHHHT HHHHHHTSB S S EEEESSS: ExpBur :bbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeebeebbeebbbbeeeeeeeeeebeebebebebbeee: Contact : b b bbbbb bbb b b b bb bb bbbbbbb b b b queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 :****************************************************************************************************: 7egq_I_1 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 SecStr :S B B EE HHHHHHHHHTT S TT SS B B SBTHHHHHGGGGG HHHHHHHHHHHHHTT S GGG S S S : ExpBur :eeeeeebeeeeebeebeebbeeeebeeeeeebeeebebeeeeeebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebeebebebeebeeeeeeeebb: Contact : b b queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 :****************************************************************************************************: 7egq_I_1 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 SecStr :TTGGGS HHHHHHSS HHHHHHHHHHHTSS EEEEE BSS EEEEE HHHHHHHHHHHHHHHHHHTT SSSSB TT STTTHHHHHHH: ExpBur :bbbeeeeebeebbeebeeeebeebbeebbebbbbbbbbbebeeebbeeeebebebebbbbbbbbbebbbbebbebbeeeeeebbbbeeeeeebbbeebbe: Contact : b b b queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 :****************************************************************************************************: 7egq_I_1 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 SecStr :HHTS SSEEEE TTHHHH HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHHTS EE TTEEEE SS TTSS HHHHHHHHHHHHHHHHH: ExpBur :ebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbebeeebeeeeebbbbbbbbbbbbbbbbbbeebbbebebbbbeebebeebbbbbbbbbbbbbbb: queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 :****************************************************************************************************: 7egq_I_1 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 SecStr :HHHHHTS STT HHHHHHHHHHHHHHHT S HHHHHHHHHHHHHH EEEETTEEEEEEESHHHHHTSS HHHHHHHHHHHHS GGG EE : ExpBur :bbbbbeeebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbeeebeeebbbebebbbbbbbbbbbbbbeeeebbebe: queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 :****************************************************************************************************: 7egq_I_1 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 SecStr : SSS S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSTTSS TTT HHHHHHHHHHGGGGG SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eeeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbeebeebbebbbebbbbeeeeeeebbebbebbbebbeebbeeebeeeeeee: queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :**************************: 7egq_I_1 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr : S GGGGSTTTTGGGGSS : ExpBur :eeeeeeeeeeebbeeeebeebbeeee: |