#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7egq_I_1_J_1

Protein Model on 7egq_I_1_J_1 (TEMPLATE: 7egq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) I 1 (N) polymer(polypeptide(L)) [926 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b J 1 (O) polymer(polypeptide(L)) [187 aa] Non-structural protein 8 :R1AB_SARS2 269D 270L 271L 272K 273Y 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 365R 368F 371L 380M 381H 383A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 403N 405V 407F 509W 514L 518S (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7egq_I_1 identity=100.0%
queryA         4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
                :****************************************************************************************************:
7egq_I_1       4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
SecStr          : HHHHHHHTTTS  EEEE SSSS    EEEEEEEESSS EEEEEEEE   EEEEEE GGG EEEEEEEEE   HHHHHHHHHHHHHH  STTB  EEEEE:    
ExpBur          :eeebeeebbeeeebebeeebeeeeeeebebbebeeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebebbe:    

queryA       104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
                :****************************************************************************************************:
7egq_I_1     104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
SecStr          :E SSS  EEEEEE S  SSBHHHHHHHHHS  TTS HHHHHHHHHTTSS GGGGGSSS S SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTEEE:    
ExpBur          :eeeeeeeebbbbbbebbebbbbbbbbbbbebeeeebeebeebbeebebbeeebbeeeebbbbbebeebeebbeebbeebbebbeebbebbeebeeebbeb:    

queryA       204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
                :****************************************************************************************************:
7egq_I_1     204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
SecStr          :E  GGGBBTTS B   SS EE STT   EE SHHHHHHHHHHHHTTGGGGTTBTTS TTS B    TT    HHHHHHHHHHHHTT  S   SSGGG  S:    
ExpBur          :ebbbbbbbbebebbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbeeebbbebeebee:    
Contact         :                                                                 bbbbb                              

queryA       304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
                :****************************************************************************************************:
7egq_I_1     304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
SecStr          :HHHHHHHHHHHHHHTTSS GGG S EEE  EETTEE  EEEEEE SSS EEE S   SSBS   HHHHHHHHT HHHHHHTSB     S  S EEEESSS:    
ExpBur          :bbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeebeebbeebbbbeeeeeeeeeebeebebebebbeee:    
Contact         :                    b b bbbbb     bbb                        b  b  b        bb bb bbbbbbb   b b    b

queryA       404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
                :****************************************************************************************************:
7egq_I_1     404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
SecStr          :S   B B   EE HHHHHHHHHTT S TT SS    B   B SBTHHHHHGGGGG       HHHHHHHHHHHHHTT S       GGG   S S S   :    
ExpBur          :eeeeeebeeeeebeebeebbeeeebeeeeeebeeebebeeeeeebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebeebebebeebeeeeeeeebb:    
Contact         : b b                                                                                                

queryA       504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
                :****************************************************************************************************:
7egq_I_1     504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
SecStr          :TTGGGS  HHHHHHSS HHHHHHHHHHHTSS     EEEEE    BSS    EEEEE HHHHHHHHHHHHHHHHHHTT SSSSB TT  STTTHHHHHHH:    
ExpBur          :bbbeeeeebeebbeebeeeebeebbeebbebbbbbbbbbebeeebbeeeebebebebbbbbbbbbebbbbebbebbeeeeeebbbbeeeeeebbbeebbe:    
Contact         :     b    b   b                                                                                     

queryA       604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
                :****************************************************************************************************:
7egq_I_1     604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
SecStr          :HHTS  SSEEEE    TTHHHH  HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHHTS EE  TTEEEE  SS  TTSS HHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbebeeebeeeeebbbbbbbbbbbbbbbbbbeebbbebebbbbeebebeebbbbbbbbbbbbbbb:    

queryA       704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
                :****************************************************************************************************:
7egq_I_1     704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
SecStr          :HHHHHTS STT   HHHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHH  EEEETTEEEEEEESHHHHHTSS  HHHHHHHHHHHHS    GGG  EE :    
ExpBur          :bbbbbeeebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbeeebeeebbbebebbbbbbbbbbbbbbeeeebbebe:    

queryA       804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
                :****************************************************************************************************:
7egq_I_1     804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
SecStr          : SSS  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESSTTSS TTT  HHHHHHHHHHGGGGG SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHS:    
ExpBur          :eeeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbeebeebbebbbebbbbeeeeeeebbebbebbbebbeebbeeebeeeeeee:    

queryA       904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :**************************:
7egq_I_1     904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :    S    GGGGSTTTTGGGGSS  :    
ExpBur          :eeeeeeeeeeebbeeeebeebbeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123