#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7dte_A_1_B_1

Protein Model on 7dte_A_1_B_1 (TEMPLATE: 7dte )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [928 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [187 aa] Non-structural protein 8 :R1AB_SARS2 270L 271L 272K 273Y 274D 323P 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 344T 368F 371L 372L 374Y 375A 378P 379A 380M 381H 382A 383A 384S 386N 387L 388L 389L 391K 392R 396F 398V 400A 402T 403N 405V 407F 447N 509W 514L 515Y 517D 518S 523D 666M (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7dte_A_1 identity=100.0%
queryA         2:ADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDF: 101
                :****************************************************************************************************:
7dte_A_1       4:ADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDF: 103
SecStr          : HHHHHHHHHHTTS  EEE SS SS    S EEEEEESSS EEEEEE   SEE  EEE GGG EEEEEEEEE   HHHHHHHHHHHHHHTT SSB    E:    
ExpBur          :eeeeebbeebbeeeebebeeeeeeeeeebeebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebeb:    

queryA       102:FKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGI: 201
                :****************************************************************************************************:
7dte_A_1     104:FKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGI: 203
SecStr          :EEE SSSS EEEEEEEEE SSBHHHHHHHHHS  TTS HHHHHHHHHTTS  HHHHTSSSSS SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTE:    
ExpBur          :bebeeeeeeebbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbeebbebbebbeeebb:    

queryA       202:VGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNC: 301
                :****************************************************************************************************:
7dte_A_1     204:VGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNC: 303
SecStr          :EEE  GGGBBSSS B   SS EE STT  EEE HHHHHHHTHHHHHTTGGGGGGBTTS TTS B    TT    HHHHHHHHHHHSTT  S   SSGGG :    
ExpBur          :ebebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbeeebbbbbeeb:    
Contact         :                                                                    bbbbb                           

queryA       302:LDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAAL: 401
                :****************************************************************************************************:
7dte_A_1     304:LDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAAL: 403
SecStr          :SSHHHHHHHHHHHHHHTTSS GGG B  EEEEEBSS EEEEE EEEETTTEEEE S   SSB    HHHHHHHHHSSHHHHHHSB    TT SS EEEES:    
ExpBur          :eebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeebbebbbebbbbebeeeeeebebeebebebebbe:    
Contact         :                     bb b bbbbb     bbbb  b                       b  bb bb  bbbbbbb bbbb bb   b b b 

queryA       402:TNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKS: 501
                :****************************************************************************************************:
7dte_A_1     404:TNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKS: 503
SecStr          :SSS     B   EE HHHHHHHHHTT S TT SS    B   B TTHHHHHHGGGGG       HHHHHHHHHHHHHHT S       GGG     TTS :    
ExpBur          :eeeeeeeebeeeeebeebeebbeeeebbeeeeebebebebeeeebebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebebbebebeebeeeeeeee:    
Contact         :bb b b                                       b                                                      

queryA       502:AGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNM: 601
                :****************************************************************************************************:
7dte_A_1     504:AGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNM: 603
SecStr          :  TTGGGT  HHHHHHHS HHHHHHHHHHTTTS    EEEEEE    BSS    EEEE  HHHHHHHHHHHHHHHHHHHT  SSSB  S  STTTHHHHH:    
ExpBur          :bbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebbeeeebebebebbbbbbbbbebbbbebbeebeeeeebbbbbeeebeeebbeeb:    
Contact         :       b    bb bb    b                                                                              

queryA       602:LKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVT: 701
                :****************************************************************************************************:
7dte_A_1     604:LKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVT: 703
SecStr          :HHHHTSS SSEEEEE   TTHHHH  HHHHHHHHHHHHTT SSSS HHHHHHHHHHHHHHHTS EEE SSEEEE  SS  TT TTHHHHHHHHHHHHHHH:    
ExpBur          :beebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeeebbbbbbbbbbbbbbbbbbebbbbebebbbbeebebbebbbbbbbbbbbbb:    
Contact         :                                                                b                                   

queryA       702:ANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWT: 801
                :****************************************************************************************************:
7dte_A_1     704:ANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWT: 803
SecStr          :HHHHHHHTS TTS   HHHHHHHHHHHHHHHS  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHHS    TTS EE:    
ExpBur          :bbbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbbebbeebbbbebebbbbbbbbbbbbbbeeeebbe:    

queryA       802:ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLD: 901
                :****************************************************************************************************:
7dte_A_1     804:ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLD: 903
SecStr          :ES TTS  S BTTBEEEEEE SSSEEEEEE  HHHHHHHHHEESSGGGGSSTT HHHHHHHHHHHGGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeeeebbeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeebeeeeee:    

queryA       902:MYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :****************************:
7dte_A_1     904:MYSVMLTNDNTSRYWEPEFYEAMYTPHT: 931
SecStr          :HSS     S GGGTTSHHHHHHTTS   :    
ExpBur          :eeeeeeeeeebeeeeeeeebeebbeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123