#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [928 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 272K 273Y 274D 323P 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 344T 368F 371L 372L 374Y 375A 378P 379A 380M 381H 382A 383A 384S 386N 387L 388L 389L 391K 392R 396F 398V 400A 402T 403N 405V 407F 447N 509W 514L 515Y 517D 518S 523D 666M (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7dte_A_1 identity=100.0% |
queryA 2:ADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDF: 101 :****************************************************************************************************: 7dte_A_1 4:ADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDF: 103 SecStr : HHHHHHHHHHTTS EEE SS SS S EEEEEESSS EEEEEE SEE EEE GGG EEEEEEEEE HHHHHHHHHHHHHHTT SSB E: ExpBur :eeeeebbeebbeeeebebeeeeeeeeeebeebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebeb: queryA 102:FKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGI: 201 :****************************************************************************************************: 7dte_A_1 104:FKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGI: 203 SecStr :EEE SSSS EEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTS HHHHTSSSSS SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTE: ExpBur :bebeeeeeeebbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbeebbebbebbeeebb: queryA 202:VGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNC: 301 :****************************************************************************************************: 7dte_A_1 204:VGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNC: 303 SecStr :EEE GGGBBSSS B SS EE STT EEE HHHHHHHTHHHHHTTGGGGGGBTTS TTS B TT HHHHHHHHHHHSTT S SSGGG : ExpBur :ebebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbeeebbbbbeeb: Contact : bbbbb queryA 302:LDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAAL: 401 :****************************************************************************************************: 7dte_A_1 304:LDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAAL: 403 SecStr :SSHHHHHHHHHHHHHHTTSS GGG B EEEEEBSS EEEEE EEEETTTEEEE S SSB HHHHHHHHHSSHHHHHHSB TT SS EEEES: ExpBur :eebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeebbebbbebbbbebeeeeeebebeebebebebbe: Contact : bb b bbbbb bbbb b b bb bb bbbbbbb bbbb bb b b b queryA 402:TNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKS: 501 :****************************************************************************************************: 7dte_A_1 404:TNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKS: 503 SecStr :SSS B EE HHHHHHHHHTT S TT SS B B TTHHHHHHGGGGG HHHHHHHHHHHHHHT S GGG TTS : ExpBur :eeeeeeeebeeeeebeebeebbeeeebbeeeeebebebebeeeebebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebebbebebeebeeeeeeee: Contact :bb b b b queryA 502:AGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNM: 601 :****************************************************************************************************: 7dte_A_1 504:AGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNM: 603 SecStr : TTGGGT HHHHHHHS HHHHHHHHHHTTTS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHHT SSSB S STTTHHHHH: ExpBur :bbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebbeeeebebebebbbbbbbbbebbbbebbeebeeeeebbbbbeeebeeebbeeb: Contact : b bb bb b queryA 602:LKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVT: 701 :****************************************************************************************************: 7dte_A_1 604:LKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVT: 703 SecStr :HHHHTSS SSEEEEE TTHHHH HHHHHHHHHHHHTT SSSS HHHHHHHHHHHHHHHTS EEE SSEEEE SS TT TTHHHHHHHHHHHHHHH: ExpBur :beebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeeebbbbbbbbbbbbbbbbbbebbbbebebbbbeebebbebbbbbbbbbbbbb: Contact : b queryA 702:ANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWT: 801 :****************************************************************************************************: 7dte_A_1 704:ANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWT: 803 SecStr :HHHHHHHTS TTS HHHHHHHHHHHHHHHS S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHHS TTS EE: ExpBur :bbbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbbebbeebbbbebebbbbbbbbbbbbbbeeeebbe: queryA 802:ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLD: 901 :****************************************************************************************************: 7dte_A_1 804:ETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLD: 903 SecStr :ES TTS S BTTBEEEEEE SSSEEEEEE HHHHHHHHHEESSGGGGSSTT HHHHHHHHHHHGGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :eeebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeeeebbeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeebeeeeee: queryA 902:MYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :****************************: 7dte_A_1 904:MYSVMLTNDNTSRYWEPEFYEAMYTPHT: 931 SecStr :HSS S GGGTTSHHHHHHTTS : ExpBur :eeeeeeeeeebeeeeeeeebeebbeeee: |