#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7cxn_A_1_B_1

Protein Model on 7cxn_A_1_B_1 (TEMPLATE: 7cxn )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [926 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [187 aa] Non-structural protein 8 :R1AB_SARS2 270L 271L 273Y 324T 325S 326F 328P 329L 330V 331R 332K 339P 340F 368F 371L 372L 375A 380M 381H 384S 386N 387L 388L 389L 390D 391K 392R 402T 403N 404N 405V 407F 509W 518S 666M (identity: 100.0 %/99.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7cxn_A_1 identity=99.9%
queryA         4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
                :****************************************************************************************************:
7cxn_A_1       4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103
SecStr          :  HHHHHHHTTS   EEESSSSSS EEEEEEEEEESSS EEEEEEEEEEEEEEEEEEGGGEEEEEEEEEEE  SHHHHHHHHHHHHHTTSTTS  EEEEE:    
ExpBur          :eeebbeebbeeeeeebeeeeeeeeeeeeebbbbeeeeebbbbbeeeeeebbbbbbeeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebebbe:    

queryA       104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
                :****************************************************************************************************:
7cxn_A_1     104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203
SecStr          :EESSS EEEEEEE S  SS HHHHHHHHHS  TTS HHHHHHHHHTTSS GGGGSSTTSS SSSSTTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTEE :    
ExpBur          :eeeeeeeebbbbbbebbebbbbbbbbbbbebeeeebeebeebbeebebbeeebbeeeebbbbeebeebeebbeebbeebbebbeebbebbeebeeebbeb:    

queryA       204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
                :****************************************************************************************************:
7cxn_A_1     204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303
SecStr          :   GGGB SSS B    S EE  TT  B   HHHHHHHHHHHHHTTTTGGGSBTTS TTS B    TT    HHHHHHHHHHS TT  S   SSGGG SS:    
ExpBur          :ebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbeebeeebbbbbeebee:    
Contact         :                                                                  bb b                              

queryA       304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
                :****************************************************************************************************:
7cxn_A_1     304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403
SecStr          :SHHHHHHHHHHHHHTTSS GGG EEEEEEEEETTEEEEEEEEEEETTTEEEE S   SSBS   HHHHHHHHS HHHHHHTSEE   SS SS EEEESSS:    
ExpBur          :bebbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeeeeeeeebbeebbbbeeeeeeeebebeebebebebbeee:    
Contact         :                    bbb bbbbb      bb                           b  bb  b    bb  b bbbbbbb         bb

queryA       404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
                :****************************************************************************************************:
7cxn_A_1     404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503
SecStr          :S     B   EE HHHHHHHHHTT S TT S     B   B SSHHHHHHGGGGG       STTHHHHHHHHHHTT S       GGG   SS  S   :    
ExpBur          :eeeeeebeeeeebeebeebbeeeebbeeeeebeeebebeeeeeebebebbbebebbeebbbbbbbbbbbbbbbebbbeebeebebebeeeeeeeeeeebb:    
Contact         :bb b                                                                                                

queryA       504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
                :****************************************************************************************************:
7cxn_A_1     504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603
SecStr          :TTGGGT  HHHHHHHS TTHHHHHHHHHTTS    EEEEEE    BSSSS  EEEE  HHHHHHHHHHHHHHHHHHHT SSSSB TT   TTTHHHHHHH:    
ExpBur          :bbbeeeeebeebbeebeeeebeebbeebbebbbbbbbebebeeebeeeeeeebebebbbbbbbbbebbbbebbebbeeeeeebbbbeeeeeebbbeebbe:    
Contact         :     b        b                                                                                     

queryA       604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
                :****************************************************************************************************:
7cxn_A_1     604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703
SecStr          :HTTTT SSEEEEE   TTTTTS  HHHHHHHHHHHHTT TTTS SHHHHHHHHHHHHHTTS EEEETTEEEE  SS  TTSSSHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbeebeeebeeeebbbbbbbbbbbbbbbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbbb:    
Contact         :                                                              b                                     

queryA       704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
                :****************************************************************************************************:
7cxn_A_1     704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803
SecStr          :HHHHHSS TTT   HHHHHHHHHHHHHHHT  S  SHHHHHHHHHHHHHEEEEE SS EEEEEEHHHHHTTSS  SHHHHHHHHHHHS    TTT EEE :    
ExpBur          :bbbbbbeebeebeeeebeebbeebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbeeebbbbbbbbbbbbbbeeeebbebe:    

queryA       804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
                :****************************************************************************************************:
7cxn_A_1     804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903
SecStr          : TTS  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESTTTTTTGGG HHHHHHHHHHTSGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS:    
ExpBur          :ebeebbeebeebebbebebeeeebbbbbbebbebbbbbbebeeeebeebbeebeebbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeeeeeee:    

queryA       904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :****** *******************:
7cxn_A_1     904:SVMLTNNNTSRYWEPEFYEAMYTPHT: 929
SecStr          :SS  S    GGGGSHHHHHGGGSS  :    
ExpBur          :eeeeeeeebeeebeeeebeebbeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123