#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7c2k_A_1_B_1

Protein Model on 7c2k_A_1_B_1 (TEMPLATE: 7c2k )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [927 aa] RNA-directed RNA polymerase :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [117 aa] Non-structural protein 8 :R1AB_SARS2 270L 271L 273Y 323P 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 368F 371L 372L 374Y 375A 378P 379A 380M 381H 383A 384S 385G 386N 387L 388L 389L 391K 392R 396F 398V 400A 402T 403N 405V 407F 447N 509W 514L 515Y 517D 518S 523D 666M (identity: 100.0 %/99.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7c2k_A_1 identity=99.8%
queryA         1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100
                :****************************************************************************************************:
7c2k_A_1       3:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 102
SecStr          : HHHHHHHHHHHTTS  EEE SS SS    S EEEEEESSS EEEEEE   SB   EEE GGG EEEEE EEE   HHHHHHHHHHHHHHTT SSB    :    
ExpBur          :eeeeeebbeebeeeeeeebeeeeeeeeeebeebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbeeeeebbeebeebbeebeebebbbebe:    

queryA       101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200
                :****************************************************************************************************:
7c2k_A_1     103:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 202
SecStr          :EEEE SSSS EEEEEE S  SSBHHHHHHHHHS  TTS HHHHHHHHHTTS  HHHHHSTTTT SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT:    
ExpBur          :bbeeebeeeebbbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbeeeebbebbeebbeebbebbebbbebbebbeeeb:    

queryA       201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300
                :****************************************************************************************************:
7c2k_A_1     203:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 302
SecStr          :EEEE  GGGBBSS  B   SS EE STT  EEE HHHHHHHTHHHHHTTGGGGGGBTTSSTTS B    TT    HHHHHHHHHHH TT  S   SSGGG:    
ExpBur          :bebebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbee:    
Contact         :                                                                     bb b                           

queryA       301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400
                :****************************************************************************************************:
7c2k_A_1     303:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 402
SecStr          : SSHHHHHHHHHHHHHHTTSS TTS EEEEEEEEETTEEEEEEEEEEETTTEEEE S    SBS   HHHHHHHHH HHHHHHTSEE   TT SS EEEE:    
ExpBur          :beebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeebbebbbebbbbebbeeeeebebeebebebebb:    
Contact         :                      bb b bbbbb     bbbb                          b  bb bb  bbbb bbbbbbb bb   b b b

queryA       401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500
                :****************************************************************************************************:
7c2k_A_1     403:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 502
SecStr          :SSSS     B   EE HHHHHHHHHTT S TT S     B   B TTHHHHHHGGGGG       HHHHHHHHHHHHHHT S       GGG     TTS:    
ExpBur          :eeeeeeeeebeeeeebeebeebbeeeebbeeeeebeeebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebebbebebeebeeeebee:    
Contact         : bb b b                                       b                                                     

queryA       501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600
                :****************************************************************************************************:
7c2k_A_1     503:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 602
SecStr          :   BTGGGT  HHHHHHHS HHHHHHHHHHTTTS    EEEEEE    BSS    EEEE  HHHHHHHHHHHHHHHHHHTT SSSSB  S  STTTHHHH:    
ExpBur          :ebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebebbbbbbbbbebbbbebbeebeeeeebbbbbebebeeebbee:    
Contact         :        b    bb bb    b                                                                             

queryA       601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700
                :****************************************************************************************************:
7c2k_A_1     603:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 702
SecStr          :HHHHHTSS SSEEEEE   TTHHHH  HHHHHHHHHHHHTT SSS  HHHHHHHHHHHHHHHTS EEEESSEEEE  S   TT TTHHHHHHHHHHHHHH:    
ExpBur          :bbeebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeeebbbbbbbbbbbbbbbbbbebbbbebebbbbeebebbebbbbbbbbbbbb:    
Contact         :                                                                 b                                  

queryA       701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800
                :****************************************************************************************************:
7c2k_A_1     703:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 802
SecStr          :HHHHHHHHTS GGG   HHHHHHHHHHHHHHHS  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHHHS    TTS E:    
ExpBur          :bbbbbbbbbbbbeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbbebbeebbbbebebbbbbbbbbbbbbbeeeebb:    

queryA       801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900
                :****************************************************************************************************:
7c2k_A_1     803:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 902
SecStr          :EES SSS  S BTTBEEEEEE SSSEEEEEE  HHHHHHHHHEESSGGGGSSTT HHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeebeebbeebeebebbebeeeeeebbbbbbebbebbbbbbbbeeeeebebbeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeeeeeeee:    

queryA       901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :*******  ********************:
7c2k_A_1     903:DMYSVMLXXDNTSRYWEPEFYEAMYTPHT: 931
SecStr          :HHSS   --   GGGSSTHHHHHTTS   :    
ExpBur          :eeeeeee--eeeeebeeeeebeebbeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123