#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [834 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [114 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 273Y 323P 324T 326F 328P 329L 330V 331R 332K 336D 338V 339P 340F 341V 344T 368F 371L 374Y 378P 379A 380M 382A 383A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 402T 403N 405V 407F 447N 509W 514L 515Y 518S 523D 666M (identity: 100.0 %/92.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bv2_A_1 identity=92.8% |
queryA 31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYA: 130 :******************** ***************** *************: 7bv2_A_1 32:VYRAFDIYNDKVAGFAKFLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETIYNLLKDCPAVAKHDXXXXXXXXXXXXXXXXXRLTKYTMADLVYA: 131 SecStr : EEEEEEE SS EEEEEEE --------------------------------- GGGGGTTTSTTB ----------------- S BHHHHHHH: ExpBur :eebbbbeeeeebbbbbebee---------------------------------eebbeebeebebbbeee-----------------eeeebbbbbbbbb: queryA 131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230 :****************************************************************************************************: 7bv2_A_1 132:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 231 SecStr :HHS TTS HHHHHHHHHTTSS GGGGGSTTTT TTT TTHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTEEEE GGGBBTT B TT EE STT : ExpBur :bbbbeeeebeebeebbbebebbeeebbeeeebbbbbebeebbebbbebbeebbebbeebbebbebbeebbbebebbbbbbbbebbbebbeebeeeeeeeb: queryA 231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330 :****************************************************************************************************: 7bv2_A_1 232:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 331 SecStr :EEE HHHHHHHHHHHHHTTGGGGGGBGGG TTS B TT HHHHHHHHHHH TT S SSGGG SSHHHHHHHHHHHHHHTTTS GGGSEEEE: ExpBur :ebebbbbbbbbbbbbbbbebbebbebeeeeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebe: Contact : bb b bb b bbb queryA 331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430 :****************************************************************************************************: 7bv2_A_1 332:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 431 SecStr :EEEEETTEEEEEEEEEEETTTEEEE S SEES HHHHHHHHH HHHHHHHSEE SS SS EEEESSSS B EE HHHHHHHHHTTTT : ExpBur :eebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeebeebbeebbbbebeeeeeebebeebebebebbeeeeeeeeebeeeeebeebeebbeeeebee: Contact :bb b bbbb b b b b bbb bbb bbbbbbb b b bb b b queryA 431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530 :****************************************************************************************************: 7bv2_A_1 432:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 531 SecStr :TT S B B TTHHHHHHGGGGG HHHHHHHHHHHGGGGTT GGG S SSSB TTGGGT BHHHHHHHS HHHHHHHHHH: ExpBur :eebebeeebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebebbbbebeebeeeebeeebbbbbeeebebeebbeebeeeebeebbeb: Contact : b b bb b b queryA 531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630 :****************************************************************************************************: 7bv2_A_1 532:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 631 SecStr :TTTS EEEEEE BSS EEEE HHHHHHHHHHHHHHHHHHHH SSSB TT STTTHHHHHHHHHTTT SSEEEEE TTHHHH HHH: ExpBur :bbebbbbbbbebebeeebeeeeebebebebbbbbbbbbebbbbebbeebeeeeeebbbbeeeeeebbbbebbeebbeebeeeebbbbebeebebbbbbbb: queryA 631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730 :****************************************************************************************************: 7bv2_A_1 632:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 731 SecStr :HHHHHHHHGGG TTT HHHHHHHHHHHHHHHTS EEE SSEEEE S TTSTTHHHHHHHHHHHHHHHHHHHHHHTS GGG HHHHHHHHHHHHH: ExpBur :bbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbeebbbbbebbbbeebebbebbbbbbbbbbbbbbbbbbbbebebeebeeeebeebbbebbeb: Contact : b queryA 731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830 :****************************************************************************************************: 7bv2_A_1 732:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 831 SecStr :HHT S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHTTSS HHHHHHHHHHHSS GGG EEE TTS S BTTBEEEEEEETTEEEEEE: ExpBur :bbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbbebbeeebbbebebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebebbebebeeeebbbb: queryA 831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :***************************************************************** *******************: 7bv2_A_1 832:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXXXXXXNTSRYWEPEFYEAMYTPHT: 930 SecStr :E HHHHHHHHHEES GGGGSHHHHHHHHHHHHHHHGGGGGSS HHHHHHHHHHHHHHHHHHHH --------------- TT TTSHHHHHGGGSS : ExpBur :bbebbebbbbbbbbeeeeeeebeebbeebbebbbebbbbeeeeeeebbebbebbbebbeebeeee---------------eeeeeeeeeebeebbbeee: |