[pdbjlvh2]Protein Model on 6xqb_A_1_B

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6xqb_A_1_B_1

Protein Model on 6xqb_A_1_B_1 (TEMPLATE: 6xqb )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [801 aa]	RNA-directed RNA polymerase :R1AB_SARS2
2	b		B 1 (B)	polymer(polypeptide(L)) [114 aa]	Non-structural protein 8 :R1AB_SARS2	270L 271L 272K 273Y 323P 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 368F 371L 374Y 375A 378P 379A 380M 381H 382A 383A 384S 387L 388L 389L 390D 391K 392R 403N 405V 407F 506F 509W 514L 518S (identity: 100.0 %/97.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6xqb_A_1 identity=97.4%

queryA        31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------: 117
                :********   *********                                                                                :
6xqb_A_1      32:VYRAFDIYXXXVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX:  64
SecStr          : EEEEEE ---  EEEEEE --------------------------------------------------------------------------------:    
ExpBur          :eebbbbee---ebbbbeeee--------------------------------------------------------------------------------:    

queryA       118:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163
                :                                                      **********************************************:
6xqb_A_1      65:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 164
SecStr          :------------------------------------------------------   SSBHHHHHHHHSS BTTB HHHHHHHHHTTS  GGGGGSTTTT:    
ExpBur          :------------------------------------------------------eebeebbbbbbbbbbbbebeebebbeebbeebebbeeeebeeeebe:    

queryA       164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263
                :**************************************************************    **********************************:
6xqb_A_1     165:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTXXXXGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 264
SecStr          : SSS TTHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTEE    STT BTT       S EE ----     THHHHHHSGGGTTTTGGGGGGBGGG TTS:    
ExpBur          :bbbebeebeebbeebbeebbbbbeebbebbbebeeebbebebbbbebbbebebeeeeebeee----eebebbbbbbbbbbbbbbbebbebbebeeeeeee:    

queryA       264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS: 363
                :****************************************************************************************************:
6xqb_A_1     265:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS: 364
SecStr          : B    SS    HHHHHHHHHHH TT SS   SSGGG SSHHHHHHHHHHHTGGGSSS TTT EEEEEEEEESSSEEEEEEEEEETTTEEEE SS  SEE:    
ExpBur          :eeeeeeeeeeebeebbeebbbebbebbeeeebbbbeebeebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeee:    
Contact         :      bbbb                                                 bbbb bbbbb     bbb                       

queryA       364:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463
                :****************************************************************************************************:
6xqb_A_1     365:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 464
SecStr          :SS  HHHHHHHHS HHHHHTTS     SS SS EEEESSSS            HHHHHHHHTTS S TT S     B     TTHHHHHHGGGGG     :    
ExpBur          :eeeeebbebbbbbbbbeebeeeeebebeebebebebbeeeeeeeeeeeeeeebeebeebbeeeebbeeebebeeebebeeeebebebebbebbebbbebb:    
Contact         :    b  b  bb  bbbbbbb  bbbbbb          b b b                                                        

queryA       464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563
                :****************************************************************************************************:
6xqb_A_1     465:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 564
SecStr          :  HHHHHHHHHHHHHHTTT       GGG      SS   TGGGTT  HHHHHHHS HHHHHHHHHHHTTS    EEEEE     BSSS    EEE  HH:    
ExpBur          :bbbbbbbbbbbbbbbbbeebeebbbeeeebeeeebeeebbbbbeeeeebeebeeebeeeebeebbebbbebbbbbbbbbeeeeebeeeeebebebebbbb:    
Contact         :                                          b  b    b   b                                             

queryA       564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663
                :****************************************************************************************************:
6xqb_A_1     565:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 664
SecStr          :HHHHHHHHHTTTTHHHHT TTSSB TT  STTTHHHHHHHHHHSS SSEEEEE   SSHHHH  HHHHHHHHHHTTTT TTT  HHHHHHHHHHHHHHTT:    
ExpBur          :bbbbbbbbbbebbebbbeeeebbbbbebebeebebbebbeebbeebeeeebbbbebeeebbbbbbbbbbbbbbbbbbebeeebeeeebbbbbbbbbbbbb:    

queryA       664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763
                :***********************************************    *************************************************:
6xqb_A_1     665:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTXXXXIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 764
SecStr          :S EEESSSEEEE      TT TTHHHHHHHHHHHHHHHHHHHHHHH ----  SHHHHHHHHHHHHHHTT     HHHHHHHHHHHHHHEEEEEETTEEE:    
ExpBur          :bbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbbbbbbbbbe----eeeeebeebbeebbebbbeeeeeeeebbeebbebbeebbbbbbebebbb:    

queryA       764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863
                :****************************************************************************************************:
6xqb_A_1     765:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 864
SecStr          :EEEEHHHHHHTSS  HHHHHHHHHHHTS    TTT EEES TTS  S SSS EEEEEEETTEEEEEEE  HHHHHHHHHS SSSTTT STTHHHHHHHHH:    
ExpBur          :bbbbeebbeebbbbebebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebebbeeebeeeebbbbebebbebbbbbbbbeeeeeeeeeebeebbbebb:    

queryA       864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPE: 919
                :********************************          **************:
6xqb_A_1     865:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXMLTNDNTSRYWEPE: 920
SecStr          :HTTGGGGGSS HHHHHHHHHHHHHHHHHHHH ----------  SSHHHHHTTS  :    
ExpBur          :eebbbbeeeeeebebebbebbbebbeebeeee----------eeeeeebebebeee:

Protein Model on 6xqb_A_1_B_1 (TEMPLATE: 6xqb )

Input Residue Numbers for Focused Sites