#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [715 aa] | NSP12 :R1AB_CVHSA | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [112 aa] | NSP8 :R1A_CVHSA | 270L 271L 273Y 274D 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 368F 371L 372L 374Y 375A 378P 379A 380M 381H 382A 383A 384S 385G 386N 387L 388L 389L 391K 392R 396F 398V 402T 403N 505P 509W 514L 515Y 518S 523D (identity: 100.0 %/86.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6nus_A_1 identity=86.3% |
queryA 118:RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWY: 217 :******************************************************************* ************ *******************: 6nus_A_1 120:RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQSLLKTVQFCDAMRDAGIVGVLTLDNQDLNGNWY: 219 SecStr : SSBHHHHHHHHHT SSS HHHHHHHHHTTSS GGGGGSTTTT SSSSTTHHHHHGGGHHHHHHHHHHHHHHHHHHHHTTEEEE TTSBBTT B : ExpBur :eebebbbeebbebbbebeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbeebbeebeebeeebbebebebeebbbebebe: queryA 218:DFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLF: 317 : * * ** *** ****************** **** * ** ** *************** ***************** ******************: 6nus_A_1 220:XXXXFVQVAPGCGVPIVDSYYSLLMPILTLTRALAAESHMDADLAKPLIKWDLLKYDFTEERLCLFDRYFKYWDQTYHPNCINCLDDRCILHCANFNVLF: 319 SecStr :---- EE TT EEE HHHHHHHGGGTTTTTTTGGGGBTTS TTS B TT HHHHHHHHHHHSTT S SSGGG SSHHHHHHHHHHHHHH: ExpBur :----eeeeeeeebebebbbbbbebbbbbbbbebbebbebeebeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebeebbbbbbbbbbbbbb: Contact : bb bb queryA 318:STVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNK: 417 :************************************************************************************** *****: 6nus_A_1 320:STVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNXXXXXXXXXGNFNK: 419 SecStr :GGGS TTSSEEEEEEEEETTEEEEEEEEEEETTTEEEE S SBSS HHHHHHHHT THHHHTTSB TT SS EEEES --------- H: ExpBur :bebbbeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeeeeebbbebbbbebbeeeeeeebeeeeeebebbeee---------eeeee: Contact : b b bbbbb bbbb b bb bb bbbbbbbbbbbb bb b b bb queryA 418:DFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD: 517 :********* **************************************************************: 6nus_A_1 420:DFYDFAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD: 519 SecStr :HHHHHHHT ----------------------------- TT HHHHHHHHHHHHHTT SS GGG TTSB TTGGGT BTHHHHT: ExpBur :ebeebbeee-----------------------------eebbeebbbbbbbbbbbbbbbeebbeebebbebebeebebeeeeeebbbbbeeeeebeebbe: Contact : b b bb queryA 518:SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGW: 617 :************************* *************************************************** ******: 6nus_A_1 520:SMSYEDQDALFAYTKRNVIPTITQMXXXXXXXXXXXXXXXXXVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVETPHLMGW: 619 SecStr :TS HHHHHHHHHHTTTS EEE ----------------- HHHHHHHHHHHHHHHHHHHT SSSB S STTTHHHHHHHHHHTT SSEEEEE : ExpBur :ebeeeebeebbeebeebbbbbbbee-----------------bbbbbbbbbbbbbbebbebbbeeeebbbbbebebeebbbbebbeebbeebeeeebbbb: Contact :b b queryA 618:DYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD: 717 :************************* *** **********************************************************************: 6nus_A_1 620:DYPKCDRAMPNMLRIMASLVLARKHNTCCNLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD: 719 SecStr : TTTTTT HHHHHHHHHHHGGG SSS HHHHHHHHHHHHHHHTS EEEETTEEEE S TTSSSHHHHHHHHHHHHHHHHHHHHHHTS GGG : ExpBur :ebeebeebbbbbbbbbbbbbbbeebeeebeeeebbbbbbbbbbbbbbbbbbbeebbbebebbbbebbebbebbbbbbbbbbbbbbbbbbbbeeeeeebee: queryA 718:KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHT: 817 :********************* ** ********************** ** ** *********** *********************************: 6nus_A_1 720:KYVRNLQHRLYECLYRNRDVDHEFVDEFYAYLRKHFSMMILSDDAVVCYNSNYAAQGLVASIKNFKAVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHT: 819 SecStr :HHHHHHHHHHHTTTSS S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHTTTSS HHHHHHHHHHHTS GGG EEE TTS S BTTBEE: ExpBur :eebeebbeebeebbbeeeeeeeebbeebbebbeebbbbbbeebebbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebbb: queryA 818:MLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWE: 917 :*********************** ************************************** ************: 6nus_A_1 820:MLVKQGDDYVYLPYPDPSRILGAXXXXXXXXXXXXXLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLXXXXXXXXXXXXXXMLTNDNTSRYWE: 919 SecStr :EEEE SSSEEEEEE HHHHHH ------------- HHHHHHHHHHHHGGGGGSS HHHHHHHHHHHHHHHH -------------- SHHHHGGG : ExpBur :bebeeeeeebbbbbbebeebeee-------------eeeeebbebbbebbbbeeeeeeeebebbebbbebbeee--------------ebbeeebeeebe: queryA 918:P: 918 :*: 6nus_A_1 920:P: 920 SecStr : : ExpBur :e: |