#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 6nus_A_1_B_1

Protein Model on 6nus_A_1_B_1 (TEMPLATE: 6nus )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [715 aa] NSP12 :R1AB_CVHSA
2 b B 1 (B) polymer(polypeptide(L)) [112 aa] NSP8 :R1A_CVHSA 270L 271L 273Y 274D 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 368F 371L 372L 374Y 375A 378P 379A 380M 381H 382A 383A 384S 385G 386N 387L 388L 389L 391K 392R 396F 398V 402T 403N 505P 509W 514L 515Y 518S 523D (identity: 100.0 %/86.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6nus_A_1 identity=86.3%
queryA       118:RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWY: 217
                :******************************************************************* ************ *******************:
6nus_A_1     120:RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQSLLKTVQFCDAMRDAGIVGVLTLDNQDLNGNWY: 219
SecStr          :   SSBHHHHHHHHHT  SSS HHHHHHHHHTTSS GGGGGSTTTT SSSSTTHHHHHGGGHHHHHHHHHHHHHHHHHHHHTTEEEE  TTSBBTT  B :    
ExpBur          :eebebbbeebbebbbebeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbeebbeebeebeeebbebebebeebbbebebe:    

queryA       218:DFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLF: 317
                :    * *  ** *** ****************** **** * ** ** *************** ***************** ******************:
6nus_A_1     220:XXXXFVQVAPGCGVPIVDSYYSLLMPILTLTRALAAESHMDADLAKPLIKWDLLKYDFTEERLCLFDRYFKYWDQTYHPNCINCLDDRCILHCANFNVLF: 319
SecStr          :---- EE  TT  EEE HHHHHHHGGGTTTTTTTGGGGBTTS TTS B    TT    HHHHHHHHHHHSTT  S   SSGGG SSHHHHHHHHHHHHHH:    
ExpBur          :----eeeeeeeebebebbbbbbebbbbbbbbebbebbebeebeeeeeeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebeebbbbbbbbbbbbbb:    
Contact         :                                                    bb bb                                           

queryA       318:STVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNK: 417
                :**************************************************************************************         *****:
6nus_A_1     320:STVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNXXXXXXXXXGNFNK: 419
SecStr          :GGGS TTSSEEEEEEEEETTEEEEEEEEEEETTTEEEE S    SBSS  HHHHHHHHT THHHHTTSB    TT SS EEEES  ---------    H:    
ExpBur          :bebbbeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeeeeebbbebbbbebbeeeeeeebeeeeeebebbeee---------eeeee:    
Contact         :      b b bbbbb     bbbb                          b  bb bb  bbbbbbbbbbbb bb   b b   bb              

queryA       418:DFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD: 517
                :*********                             **************************************************************:
6nus_A_1     420:DFYDFAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYD: 519
SecStr          :HHHHHHHT ----------------------------- TT       HHHHHHHHHHHHHTT SS      GGG     TTSB  TTGGGT BTHHHHT:    
ExpBur          :ebeebbeee-----------------------------eebbeebbbbbbbbbbbbbbbeebbeebebbebebeebebeeeeeebbbbbeeeeebeebbe:    
Contact         :                                                                                       b   b    bb  

queryA       518:SMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGW: 617
                :*************************                 *************************************************** ******:
6nus_A_1     520:SMSYEDQDALFAYTKRNVIPTITQMXXXXXXXXXXXXXXXXXVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVETPHLMGW: 619
SecStr          :TS HHHHHHHHHHTTTS    EEE -----------------  HHHHHHHHHHHHHHHHHHHT  SSSB  S  STTTHHHHHHHHHHTT SSEEEEE :    
ExpBur          :ebeeeebeebbeebeebbbbbbbee-----------------bbbbbbbbbbbbbbebbebbbeeeebbbbbebebeebbbbebbeebbeebeeeebbbb:    
Contact         :b    b                                                                                              

queryA       618:DYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD: 717
                :************************* *** **********************************************************************:
6nus_A_1     620:DYPKCDRAMPNMLRIMASLVLARKHNTCCNLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIAD: 719
SecStr          :  TTTTTT  HHHHHHHHHHHGGG SSS  HHHHHHHHHHHHHHHTS EEEETTEEEE  S   TTSSSHHHHHHHHHHHHHHHHHHHHHHTS GGG   :    
ExpBur          :ebeebeebbbbbbbbbbbbbbbeebeeebeeeebbbbbbbbbbbbbbbbbbbeebbbebebbbbebbebbebbbbbbbbbbbbbbbbbbbbeeeeeebee:    

queryA       718:KYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHT: 817
                :*********************  ** ********************** ** ** *********** *********************************:
6nus_A_1     720:KYVRNLQHRLYECLYRNRDVDHEFVDEFYAYLRKHFSMMILSDDAVVCYNSNYAAQGLVASIKNFKAVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHT: 819
SecStr          :HHHHHHHHHHHTTTSS  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHTTTSS  HHHHHHHHHHHTS    GGG EEE  TTS  S BTTBEE:    
ExpBur          :eebeebbeebeebbbeeeeeeeebbeebbebbeebbbbbbeebebbbbbbbebbeeebbbbbebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebbb:    

queryA       818:MLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWE: 917
                :***********************             **************************************              ************:
6nus_A_1     820:MLVKQGDDYVYLPYPDPSRILGAXXXXXXXXXXXXXLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLXXXXXXXXXXXXXXMLTNDNTSRYWE: 919
SecStr          :EEEE SSSEEEEEE  HHHHHH ------------- HHHHHHHHHHHHGGGGGSS HHHHHHHHHHHHHHHH --------------   SHHHHGGG :    
ExpBur          :bebeeeeeebbbbbbebeebeee-------------eeeeebbebbbebbbbeeeeeeeebebbebbbebbeee--------------ebbeeebeeebe:    

queryA       918:P: 918
                :*:
6nus_A_1     920:P: 920
SecStr          : :    
ExpBur          :e:    


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