#WARNING:no index is registered index "YP_009725304.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725304.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 8sqj_B_1_A_1

Protein Model on 8sqj_B_1_A_1 (TEMPLATE: 8sqj )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) B 1 (B) polymer(polypeptide(L)) [187 aa] Non-structural protein 8 :R1AB_SARS2
2 b A 1 (A) polymer(polypeptide(L)) [929 aa] RNA-directed RNA polymerase :R1AB_SARS2 80R 83V 84T 86A 87M 88Q 90M 91L 94M 95L 97K 98L 104N 106I 112D 113G 114C 115V 116P 117L 118N 119I 120I 121P 122L 123T 125A 127K 128L 129M 130V 131V 133P 137T 141T 149Y 183P (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8sqj_B_1 identity=100.0%
queryA         6:FSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNN: 105
                :****************************************************************************************************:
8sqj_B_1       6:FSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNN: 105
SecStr          :  HHHHHHHHHHHHHHHHHHHHT   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHTS TTHHHH:    
ExpBur          :ebeeebeeeeeebeeeeeeeeeeeeeeeebbebeeeeeebeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebee:    
Contact         :                                                                          b  bb bbb bb  bb bb     b 

queryA       106:IINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRAN: 192
                :***************************************************************************************:
8sqj_B_1     106:IINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRAN: 192
SecStr          :HHHTSSSS   GGGHHHHH SEEEEEE SHHHHHHHS SSEEE SSSEEEEEEEE TT  B  TTS STTTGGGS S EEEEEEE  :    
ExpBur          :beeebeeeeeeeeebeeebeeeeeeebeebeebeeebeeeebeeeebebebeebbbeeeeebeeeebeeeebeebeeebebbbeebe:    
Contact         :b     bbbbbbbbbbbb b bbbbb b   b   b       b                                 b                      


Input Residue Numbers for Focused Sites

ex) 2,15,123