Protein Model on 6wct_C_1_H_1 (TEMPLATE: 6wct )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(PALS1_HUMAN) C 1 (C) polymer(polypeptide(L)) [199 aa] Guanylate kinase :B2FT06_STRMK
2 b H 1 (C) non-polymer(5GP) GUANOSINE-5'-MONOPHOSPHATE 512P(S) 528Y 547E 549G(A) 551F(V) 556Y(K) 557G 558T 576S(E) 577L(I) 578R(D) 581S(G) (identity: 33.3 %/29.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6wct_C_1 identity=29.1%
queryA       483:ILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSL: 582
                :*   *   *                *     * *  *  ** *  *****   **  **** * **        **   **      *   **    *  :
6wct_C_1      26:IVAAPSGAGKSSIVNATLARDP-QIALSISFTSRAMRPGEVNGQHYHFVSAEKFEQMIAAGDFFEHAWVHGDWKGTARQSVEPQLAAGQDVLLEIDWQGA: 124
SecStr          :EEE  TTS HHHHHHHHHHH T-TEEE   EE S   TT  TTTS EE  HHHHHHHHHHT EEEEEEETTEEEEEEGGGTHHHHHTT EEEE   HHHH:    
ExpBur          :bbbbbeebebeebbeebbeebe-ebeebebbbbbeeeeeeeeeeeeebeeeeebeebeeeeebbbebebeeebbbbbeeebeeebeeeebbbbebbeebb:    
Contact         :                             b               b                  b b b    bbb                 bbb  b 

queryA       583:KTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLIN: 660
                :   *         ** ***   *                        **   *   **  ***   * *  **     :
6wct_C_1     125:QQVRQLVPGTVTVFILPPSKQALQDRMXXXXXXSEAVIAQRLGAARDEMLHFN--EFDYVIVNEVFDTAVDELCAIFT: 200
SecStr          :HHHHHHSTT EEEEEE S HHHHHHH ------ HHHHHHHHHHHHHHHTTGG--GSSEEEE SSHHHHHHHHHHHHH:    
ExpBur          :eebeeebeebbbbbbebeeeeebeeeb------eeeeeeeeeeebeebbeeee--ebeeebebeeeeebbeebbebbe:    


Input Residue Numbers for Focused Sites

ex) 2,15,123