Protein Model on 6mfu_D_1_K_1 (TEMPLATE: 6mfu )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(PALS1_HUMAN) D 1 (D) polymer(polypeptide(L)) [215 aa] Guanylate kinase :J9VQ84_CRYNH
2 b K 1 (D) non-polymer(5GP) GUANOSINE-5'-MONOPHOSPHATE 488Q(S) 492Q(K) 512P(S) 516R 519R 528Y 547E 551F 556Y 557G 558T 576S(D) 577L(I) 578R(E) 581S(G) 623E(R) (identity: 50.0 %/29.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6mfu_D_1 identity=29.9%
queryA       480:RPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRT: 579
                :**    **   *   *   *       *   * ****  *  *  ** ****    *      * * *  **  * ***              * *    :
6mfu_D_1      20:RPLVICGPSGTGKSTLLKTLFESQPNTFGFSVSHTTRKPRPGEENGREYHFVTKEEFMEGVGKGEFLEWAEFGGNCYGTTFAALTAL--HPRRCILDIEL: 117
SecStr          :S EEEE  TTSSHHHHHHHHHHHSTTTEEE  EEESS   TT  BTTTEEE  HHHHHHHHHTT EEEEEEETTEEEEEEHHHHHTT--TTSEEEEE  H:    
ExpBur          :ebbbbbbbbbbbbeebbeebeeeeeeebbebbbbbbbeebeebeeeebbebeeeeebeebeeeeebbbebebeeebbbbbeebbeeb--eeebbbbbbbb:    
Contact         :        b   b                   b   b  b        b                  b   b    bbb                 bbb 

queryA       580:QSL------KTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQEL: 655
                :*          *    * *   *  ***   *   *   *                *         *   ** **  *   *:
6mfu_D_1     118:QGVLQLKAKAPLQTPPLEPVFLFLSPPSISQLKSRLSGRGTETDASIRKRLDAAKEELRYAKEGKYDVYVVNDDLKVAGEKL: 199
SecStr          :HHHHHHHHHGGGSSS    EEEEEE S HHHHHHHHHHH  S HHHHHHHHHHHHHHHHHHTTT SSEEEE SSHHHHHHHH:    
ExpBur          :ebbeebeeebeeeeeeeebbbbbbbbeebeebeeebeeeeebeeebbeebbeebeebbebbeeeebebbbbbeeeeebbeeb:    
Contact         : b                                               b                                                  


Input Residue Numbers for Focused Sites

ex) 2,15,123