[pdbjlvh2]Protein Model on 5ypo_B_1_F

Protein Model on 5ypo_B_1_F_1 (TEMPLATE: 5ypo )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(PALS1_HUMAN)	B 1 (A)	polymer(polypeptide(L)) [181 aa]	Disks large homolog 4 :DLG4_RAT
2	b		F 1 (A)	non-polymer(GOL)	GLYCEROL	598A(R) 599P 625I(F) 628T(A) 629R(T) 632E (identity: 33.3 %/39.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5ypo_B_1 identity=39.2%

queryA       480:RPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVS-RQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLR: 578
                :****  **     *     *     * * * ******  *  *  ******** *   * ** * **** *     *****  *** *   ** * *   :
5ypo_B_1      11:RPIIILGPTKDRAND---DLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVS: 107
SecStr          :  EEEESTTHHHHHH---HHHHH TTTEE    EE S   TT  BTTTBEE S HHHHHHHHHTT EEEEEEETTEEEEEEHHHHHHHHHTT EEEE   :    
ExpBur          :bbbbbbebbbeebbe---ebeeeeeebbbeebebbbbeeeeebeeeeeeebeeeeebbeeeeeeebbbeeeeeeeebebbbbebbeebbeeeebbbbebe:    

queryA       579:TQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLINKL: 662
                :      *    * *  *** * * *          *    *  *         **     *            *    * *  *:
5ypo_B_1     108:ANAVRRLQAAHLHPIAIFIRPRSLENVLEI----NKRITEEQARKAFDRATKLEQEFTECFSAIVEGDSFEEIYHKVKRVIEDL: 187
SecStr          :HHHHHHHHHTT   EEEEE  SSHHHHHHH---- TTS HHHHHHHHHHHHHHHHHTGGG SEEE  SSHHHHHHHHHHHHHHH:    
ExpBur          :bebbeebeeeebebbbbbbebeebebbeeb----beeeeeeebeebeeebeebeeebeebbeeebebeebeebbeebbebbeee:    
Contact         :                   bb                         b  bb  b

Protein Model on 5ypo_B_1_F_1 (TEMPLATE: 5ypo )

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