Protein Model on 2xkx_B_1_A_1
(TEMPLATE: 
2xkx
)Protein Model on 2xkx_B_1_A_1
(TEMPLATE: 2xkx
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(PALS1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [718 aa] | DISKS LARGE HOMOLOG 4 :DLG4_RAT | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [721 aa] | DISKS LARGE HOMOLOG 4 :DLG4_RAT | 276D(E) 277S(G) 278V(I) 279I(F) 280I 281S 282R(F) 289A 290E(D) 291K(L) 292S 293G 294L(E) 295L 296H(R) 297E(K) 298G 300E(Q) 301V(I) 302L 304I(V) 305N 306G 308E(D) 318F(A) 324M(A) 325H(G) 326G(Q) 327T 328L(V) 329T 330F(I) 331V(I) 336Q(A) 337Q 338I(Y) 339K 340P 341P(E) 342P(E) 344K(S) 345E 346T(A) 347V(K) 349H 350V(I) 351K(R) 352A 353H(L) 354F 356Y 357D 358P(K) 359S(T) 370G(A) 372S 375K(F) 376G 381V 382I 383S(D) 384Q(A) 389W 390W 407V(I) 408P 409G(S) 410K 411S(R) 414Q(E) 415Q(R) 417E 436W 444K(R) 445R(L) 459D(R) 462E(S) 463I(V) 464L 466Y 467E 468E(T) 469M(V) 470S(T) 473H(Q) 476A(V) 480R 481P 482I 483I 484L(I) 485I(L) 486G 487P 488Q(T) 489N(K) 492Q(A) 493N 494E(D) 498R(D) 499L 500M(L) 501N(S) 503E(F) 504K(P) 505D 506R(K) 507F 508A(G) 509S 510A(C) 511V 512P 513H 514T 515T 516R 517S(P) 518R(K) 519R 520D(E) 521Q(Y) 522E 523V(I) 524A(D) 525G 526R 527D 528Y 529H 530F 533R 536F(M) 537E 540I 543G(H) 544K 545F 546I 547E 548H(A) 551F(Y) 554N(H) 555L 556Y 557G 558T 559S 561D(Q) 562S 563V 564R 565Q(E) 566V 567I(A) 568N(E) 569S(Q) 570G 571K 573C 574L(I) 575L 576S(D) 577L(V) 578R(S) 579T(A) 581S(A) 584T(R) 585L 586R(Q) 588S(A) 590L 591K(H) 592P 593Y(I) 594I(A) 595I 596F 597I 598A(R) 600P(R) 604R(N) 605L(V) 606R(L) 608L(I) 613G(N) 614K 615N(R) 616P(I) 621L(A) 624I(A) 625I(F) 627K(R) 628T(A) 630E(K) 631M(L) 632E 633Q 635N(F) 636G(T) 637H(E) 638Y(C) 639F 640D(S) 641T(A) 642A(I) 643I(V) 644V(E) 645N(G) 646S(D) 647D(S) 648L(F) 649D(E) 650K(E) 651A(I) 652Y 653Q(H) 654E(K) 655L(V) 656L(K) 657R 658L(V) 659I 660N(E) 661K(D) 662L 663D(S) 664T(G) 667Q(I) (identity: 40.6 %/36.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2xkx_B_1 identity=36.3% |
queryA 276:DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPPAK--ETVIH------------------------: 349
: ** * ** * ** * ** * ** * * * * * ** * ** :
2xkx_B_1 331:EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTII----AQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKR: 426
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
Contact :bbbbbbb bbbbbbbbbb bbb bbb b b bbbbbbbb bbbbbbb b bbbb bbbbbbbbbb bbb b bb
queryA 350:---VKAHFDYDPSDDPYVPCREL--GLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKK: 444
: * **** * * * *** ** **** * **** * * * * ** * :
2xkx_B_1 427:GFYIRALFDYDKTKD----CGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERRE------------------WS------R: 498
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
Contact :bbbbbbbb bbbb b b bb bbbb bb bbbbb bb b b b
queryA 445:RKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVS-RQAFEADIAAG: 543
: * * ** **** ** * * * * * ****** * * ******** * * ** * :
2xkx_B_1 499:LKXXXWGSSSGSQGREDSVLSYETVT--QMEVHYARPIIILGPTKDRAND---DLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIRAH: 593
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
Contact :b b bbb bbbbb b b bbbbbbbbbb bbb bbbb bbbbbbbbbbbbbbbbbbbbbbbbbbbb b bb b b
queryA 544:KFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAI: 643
:**** * ***** *** * ** * * * * * *** * * * * * * ** * :
2xkx_B_1 594:KFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLEI----NKRITEEQARKAFDRATKLEQEFTECFSAIV: 689
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
Contact :bbbbb b bbbbbb bbbbbbbbbbb bbbbbbb b bbb b bbbbbbbbb b bbb b bbbb b bb bb bbbb bbbbbbbbb
queryA 644:VNSDLDKAYQELLRLINKLDTEPQWVPS: 671
: * * * * *** :
2xkx_B_1 690:EGDSFEEIYHKVKRVIEDLSGPYIWVPA: 717
SecStr :----------------------------:
ExpBur :----------------------------:
Contact :bbbbbbbbbbbbbbbbbbbbb b
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[assembly_id:1]
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