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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IL6RA_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [296 aa] | Interleukin-12 subunit p40 :IL12B_HUMAN | |
2 | b | G 1 (D) | non-polymer(MAN) | alpha-D-mannopyranose | 257Y(V) 285G(R) 287R(N) 288H(A) (identity: 0.0 %/27.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3d87_D_1 identity=27.8% |
queryA 39:PGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAG--------------TVHLLVD--VPPEEPQLSCF: 122 :** * *** ** * * * * * * * * * * * * * * * * : 3d87_D_1 20:PGEMVVLTCDT--PEEDG-ITWTL------DQSSEVLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCE: 110 SecStr :T B EEE S--S SS-EEEEE------TT S EESSEEE BSSGGG EEEEEEESS EEEEEEEEEETTEE SS SSSS EEE: ExpBur :eeeebebebeb--eeeee-bebbb------eeeeeeeeeeeebebebeeeeebbebbbbeeeeeebebbbbbbbeeeeeebeebbeebeeeeeeebbebb: queryA 123:RKSPLSNVVCEW----------------GPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQ: 206 : * * * * * * * ** * * * * * * * * * * : 3d87_D_1 111:AKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERVRGDNKEY----EYSVECQEDS---ACPAAEESLPIEVMVDAVHKLKYEQYTS: 203 SecStr :BSSSSSEEEEEEEE SS EEEEEEE SSS EEEEEEEEEE BSSSSB E----EEEEEEEETT--- SSS S EEEEEEE TTB EEEEE: ExpBur :bebbebebbbbbbbebeeebebbbebbbbeeeeeebebeeeeeebeeebeeeebb----bbbbebebee---eeeeeebeeebbbebbbbbebbbbebee: queryA 207:TFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNS--SFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWS: 304 : * * **** * * * * * * * * * * * ** *** **: 3d87_D_1 204:SFFIRDIIKPDPPKNLQLKPL-KNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVXXXXXXXXXDRVFTDKTSATVI----CRKNASISVRAQDRYYSSSWS: 298 SecStr :EE HHHHB EEEE -TT SEEEEE TTS S TTTS EEE B --------- B SSSEEEEE---- SSS B EEESSS : ExpBur :ebbbbebbbbeebeebeeeee-eeeeebebebebbeebbeeeeebbbbbbbee---------ebeebeeeebebe----beeeeebbbebbbeeeebeeb: Contact : b b bb queryA 305:EWS: 307 :** : 3d87_D_1 299:EWA: 301 SecStr : : ExpBur :eeb: |