[pdbjlvh2]Protein Model on 7b3c_A_1_D

#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7b3c_A_1_D_1

Protein Model on 7b3c_A_1_D_1 (TEMPLATE: 7b3c )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [814 aa]	RNA-directed RNA polymerase nsp12 :R1AB_SARS2
2	b		D 1 (P)	polymer(polyribonucleotide)	DNA/RNA (5'-R(PCPUPAPCPGPCPA)-D(P(RMP))-R(PGPUP*G)-3')	4891D 5015D 5074S 5083N 5150L 5151S 5152D 5205C 5206S 5228R 5232A 5241K 5249E 5250R 5253S 5257D (identity: 100.0 %/97.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7b3c_A_1 identity=97.8%

queryA      4423:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------:4509
                :********************                                                                                :
7b3c_A_1      34:VYRAFDIYNDKVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX:  66
SecStr          : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------:    
ExpBur          :eeebbbeeeeebbbbbebee--------------------------------------------------------------------------------:    

queryA      4510:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY:4555
                :                                                      **********************************************:
7b3c_A_1      67:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 166
SecStr          :------------------------------------------------------   SSBHHHHHHHHHS  SS  HHHHHHHHHTTSS THHHHSTT S:    
ExpBur          :------------------------------------------------------eebebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebb:    

queryA      4556:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK:4655
                :****************************************************************************************************:
7b3c_A_1     167:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 266
SecStr          : TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEE B  GGGBBTTS B   TT EE STT    B HHHHHHHHHHHHHTTGGGGGGBGGG SSS:    
ExpBur          :bbbebeebbebbeebbeebbebbeebbebbeebeeebeebbbbbbbbbbebebeeeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeee:    

queryA      4656:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS:4755
                :**************************************************************************************************  :
7b3c_A_1     267:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLXX: 366
SecStr          : B    TT    HHHHHHHHHHHSTT  S   SSGGG SSHHHHHHHHHHHHHHHTTS GGGSEEEEEEEEETTEEEEEEEEEEETTTEEEE SS   --:    
ExpBur          :eeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebeebebbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeee--:    

queryA      4756:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM:4855
                :   *************************************************************************************************:
7b3c_A_1     367:XXXSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 466
SecStr          :--- HHHHHHHHH HHHHHHHSEE   SS SS EEEESSSS     B   EE HHHHHHHHHTT S TT S     B   B TTHHHHHHHGGGG     :    
ExpBur          :---eebeebbbebbbbebeeebeebebeebebebbbbeeeeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeebebbbebbbebebbeebb:    

queryA      4856:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC:4955
                :****************************************************************************************************:
7b3c_A_1     467:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 566
SecStr          :  HHHHHHHHHHHHHHTSSS      GGG   S SSSB  TTHHHH BHHHHHHHS HHHHHHHHHHHTTS    EEEEEE    BSSSS  EEEE  HH:    
ExpBur          :bbbbbbbbbbbbbbebbeebebbbbebeebeeeeeeeebbbbbeeebebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeeebebebebbbb:    
Contact         :                                   b                                                                

queryA      4956:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL:5055
                :****************************************************************************************************:
7b3c_A_1     567:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 666
SecStr          :HHHHHHHHHHHHHHHHHT SSSSB TT  STTTHHHHHHHHHTSS SSEEEEEE  TTHHHH  HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHTT:    
ExpBur          :bbbbbebbbbebbeebeeeeebbbbbebeeeebbbbebbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbebeeebeeeebbbbbbbbbbbbb:    
Contact         :                                                           b                                        

queryA      5056:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV:5155
                :****************************************************************************************************:
7b3c_A_1     667:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 766
SecStr          :S EEEETTEEEE  SS  TT TTHHHHHHHHHHHHHHHHHHHHHHHS SSS   HHHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEE:    
ExpBur          :bbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbbbbbbbbbbebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebb:    
Contact         :                  b        b                                                                  bbb   

queryA      5156:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA:5255
                :****************************************************************************************************:
7b3c_A_1     767:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 866
SecStr          :EEEEHHHHHTTSS  HHHHHHHHHHTT     SSS EEES TTT  S BTTBEEEEEEETTEEEEEEE  HHHHHHHHHEESSSGGG TTT SSHHHHHH:    
ExpBur          :bbbbeebbeeebbbeeebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeeeebeeebeebbebb:    
Contact         :                                                 bb                     b   b        b       bb  b  

queryA      5256:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT:5321
                :*********************************             ********************:
7b3c_A_1     867:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXXXXXXXDNTSRYWEPEFYEAMYTPHT: 932
SecStr          :HHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHH ------------- TTHHHHSHHHHHHTTSTT :    
ExpBur          :bebbbbeeeeeeebbebbebbbebbeebbeeee-------------eeebeebeeeebeebbeeee:    
Contact         : b

Protein Model on 7b3c_A_1_D_1 (TEMPLATE: 7b3c )

Input Residue Numbers for Focused Sites