#WARNING:no index is registered index "YP_009724389.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724389.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (B) | polymer(polypeptide(L)) [585 aa] | Helicase :R1AB_SARS2 | |
2 | b | C 1 (B) | non-polymer(JOV) | 3-chloro-N-(1-hydroxy-2-methylpropan-2-yl)benzamide | 5796F 5798M 5819V 5822E 5823F 5826R 5827N 5914L 5915E 5917P (identity: 100.0 %/98.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5rmj_A_1 identity=98.8% |
queryA 5326:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD:5425 :****************************************************************************************************: 5rmj_A_1 2:VGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSD: 101 SecStr : EE TTT EESEEESSSTT EE HHHHHHHHTTSS EESSSEES STT GGGEEE SSSEEEGGG SS EESB SSSB S SS S: ExpBur :eeebbeeebebbbebbebeeebebbbbbbeebbeebebeebbbeeebebebeebeeeebeebebbeeebebeeeeeeeeeebbeeeebebeeeeeeebee: queryA 5426:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE:5525 :****************************************************************************************************: 5rmj_A_1 102:NVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFE: 201 SecStr : HHHHHHHH S BHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHTS EEEEE SSSEEEEEE TTS STTS EEEEEE SSSEEEEEEE EE: ExpBur :ebeebbebbebebbebebbebbbebeeebbbbbbbbbebebbeeeeebbebebeeeeeebebebebeeeeeebebbeebebbbbbeeeeeeeebeebebe: queryA 5526:KGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS:5625 :** **********************************************************************************************: 5rmj_A_1 202:KGXXXXAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPS: 301 SecStr :E ---- EEE SS TT EEE S SS B SS S SS TTTGGGHHHHHHHTTBSEEEEE TTS HHHHHHHHHHHSTT: ExpBur :ee----ebebeeeeeeebeeebbbebbeeebeebebebbbeeeeeeeeeebeeeeeeeeebeebeeebeebbebbbbbbbbbbebebeebbbbbbebbee: queryA 5626:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD:5725 :*********************************** **************************************************************: 5rmj_A_1 302:ARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPAXXXVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGD: 401 SecStr : EEEEESSHHHHHHHHHHHHTTS GGGEEE --- SSEES TTSSEEEEEGGG SEEEEEEEE GGG HHHHHHHHHHEEEEEEEEEE : ExpBur :bbbbbbbeeeebbbebbeebeebbeeeebbbbeee---eebbeebeeeeeebebbbbbbebbbebebebbbbbebbebebbbbbbbbeebebebbbbbbb: queryA 5726:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT:5825 :****************************************************************************************************: 5rmj_A_1 402:PAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLT: 501 SecStr :TTS TT BS GGGT HHHHHHHHT SEE EESSS HHHHHHHHHHHSTT EESS S EEEEE EEE SS EEEHHHHHHHHHHHH: ExpBur :bbbbbbebebbeeeebebebbbbbbeebeeeeeebebeebebbbbbbbebbbebbbeeebeeeeeeeeebbbbeeeeeeeeeeebbbbeebbbbbeebbe: Contact : b b b bb queryA 5826:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP:5917 :********************************************************************************************: 5rmj_A_1 502:RNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIP: 593 SecStr :H GGGGG EEEES HHHHHHHHHHH EEEHHHHTT EEEEEEE STTTT HHHHHHHHTTEEEEEEEEES HHHHHH SEE : ExpBur :eeeebeebbbbbbbbbbbebbeeebebeeebbeebbeeeeebbbbbbbbeeeebbbebbbbbbbbbbeebbbbbbbbeebbeebebeeeeee: Contact :bb bb b |