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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [383 aa] | Eukaryotic initiation factor 4A-I :IF4A1_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [238 aa] | Eukaryotic translation initiation factor 4 gamma 1 :IF4G1_HUMAN | 312Y 496Y 497A(E) 498V(T) 499R(L) 500A(T) 501I 502K(T) 508Q 539Q(D) 540F 541S(T) 564G 565D(S) 567R 612M(K) (identity: 43.8 %/33.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8huj_A_1 identity=33.9% |
queryA 249:FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP: 347 : * * * * * * * ** * **** * * *** * * * ****: 8huj_A_1 86:LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTP: 181 SecStr :HHHHHT EEEE TT-SSHHHHHHHHHHHHS SSS S EEEE SSSHHHHHHHHHHHHTTTTT EEE--- SSS HHHHHHHHHH SEEE H: ExpBur :ebbeeeebbbbbbeee-ebbbbbbbbbbbeebeeeeebbbbbbbbbeeeebeebbeebeebbeebeebbbb---beeeeeeeebeeebeeebbbbbbbbb: Contact : b queryA 348:GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP: 447 :** * * ****** ** * * * * ** *** * ** * * * * * : 8huj_A_1 182:GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN: 274 SecStr :HHHHHHHTTTSS SSS EEEEE HHHHHHHT HHHHHHHHHHS SS ------EEEEEESS H-HHHHHHHHHSSS EEEE GGGSEEEEE : ExpBur :bbbeebbeeebbeeeebebbbbbbbbebbeeeeeebbeebbeebeeeb------bbbbbbbeeee-ebeebbeebbeeebebebeeeeeebeebebbbbe: queryA 448:VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG: 547 :* ** * * * * * ** ** * * * * **: 8huj_A_1 275:V--------ER------------------------EEWK--LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG: 326 SecStr : -------- ------------------------TTHH--HHHHHHHHHSS S----- EEEE SSSHHHHHHHHHH---------HHTT EE T: ExpBur :b--------ee------------------------eeeb--bebbbebeeebebe-----bbbbbbeeeebbeebbeeb---------eeeeeebbbbee: Contact : bbbbbbb b bbb queryA 548:DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645 :* ** * * * ** ** ***** * *** ** ** ***** ** * * ** * * *** *: 8huj_A_1 327:DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE: 419 SecStr :T SHHHHHHHHHHHHTS SEEEE HHHHHHS SEEEESS SSTTHHHHHHTGGG TTSS EEEEE GGGHHHHHHH-----HHHTT EE: ExpBur :ebeeeebeebbeebeeeebebbbbbbebbeeeebeebebbbbbbbbeeeebbbebbbbeeebbeebbbbbbbbeeeeeebeeb-----eeebeeebee: Contact : bb b b |