Protein Model on 7znk_FA_1_Z_1 (TEMPLATE: 7znk )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(DDX1_HUMAN) FA 1 (p) polymer(polypeptide(L)) [367 aa] Spliceosome RNA helicase DDX39B :DX39B_HUMAN
2 b Z 1 (j) polymer(polypeptide(L)) [914 aa] THO complex subunit 2 :THOC2_HUMAN 30A(H) 34P 459L 470H(L) 505K(E) 506M(F) 507D(N) 529Q 530G(N) 540F 541S(P) 563K(D) 564G(F) 565D(Q) 567R 583G(R) 585P(N) (identity: 29.4 %/33.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7znk_FA_1 identity=33.6%
queryA        11:PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC: 110
                :**   *        *   * * **    * ***  *    ***  *     *                                                :
7znk_FA_1     54:PELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAXXXMGKTAVFVLATLQ------------------------------------------------: 105
SecStr          :HHHHHHHHHHT  S  HHHHHHHHHHTTT  EEEE ---  HHHHHHHHHHH------------------------------------------------:    
ExpBur          :eebeebeeebeeeeebebbeebbeebeeeebbbbbe---eebebbbbbbbbe------------------------------------------------:    
Contact         :                   b   b                                                                            

queryA       111:CQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK: 210
                :                                                                                                    :
7znk_FA_1     -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       211:DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK----------ALIVEPSRELAE: 300
                :                                                                                         *     **** :
7znk_FA_1    106:------------------------------------------------------------------------------QLEPVTGQVSVLVMCHTRELAF: 127
SecStr          :------------------------------------------------------------------------------H    TT   EEEE S HHHHH:    
ExpBur          :------------------------------------------------------------------------------ebeeeeebbbbbbbbeeeebbe:    

queryA       301:QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK: 399
                :*       * **  * *       **        **  *   ********   *     ***       *** *  * *       *    *   *   *:
7znk_FA_1    128:QISKEYERFSKYMPNVKVA--VFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIFRMTPHEK: 222
SecStr          :HHHHHHHHHTTT TT  EE--EE TTS HHHHHHHHHSS  SEEEE HHHHHHHHHHTSS  TT  EEEEETHHHHHHSHH---HHHHHHHHHHHS TTS:    
ExpBur          :ebbebbeebbeebeebeeb--ebeeeeeeeebeeebeeebbbbbbbbbebbbebbeeebbebeebebbbbbebbebbeeee---bbeebeebbeebbeeb:    

queryA       400:RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG: 494
                :  **   **** *        * *  *             * *      *    * *   *   *        **                         :
7znk_FA_1    223:--QVMMFSATL-SKEIRPVCRKFMQDPMEIFVXXXXKL--TLHGLQQYYVKLKDNEKNRKLFDLL--------DVL------------------------: 285
SecStr          :--EEEEEES  - TTHHHHHHTT SS EEE  ----  --B TTEEEEEEE  STTHHHHHHHHH--------HH ------------------------:    
ExpBur          :--bbbbbbeeb-beebbeebeebbeebeebee----eb--ebeebebbebebeeeebeeebbebb--------eeb------------------------:    
Contact         :                                                                b          b                        

queryA       495:EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD: 594
                :             *  **      *  * *    *          *     *      **      **    * *  *    ** **  *    *   * :
7znk_FA_1    286:----------EFNQVVIFVKSVQRCIALAQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPE: 366
SecStr          :----------  SEEEEE SSHHHHHHHHHHHHTSS---------  EEEE SSS HHHHHHHHHHHHTTS SEEEES   SS    TTEEEEEESS  S:    
ExpBur          :----------ebebbbbbbeeeeebeebbeebeeee---------eebbbbbeebeeeebeeebeebeeeeeebbbbbeeeeebbebeebbbbbbbbbbe:    
Contact         :          bbb                     bb         bb                     bbb b               b b         

queryA       595:EKQNYVHRIGRVGRAERMGLAISLVATEKE: 624
                :    * **  * **    ****  *  *  :
7znk_FA_1    367:DSDTYLHRVARAGRFGTKGLAITFVSDEND: 396
SecStr          :SHHHHHHHH B  SS   EEEEEEE SHHH:    
ExpBur          :ebebbbebbbbeeeeeeebbbbbbbeeeeb:

Input Residue Numbers for Focused Sites

ex) 2,15,123