Protein Model on 7am2_LB_1_VB_1
(TEMPLATE: 
7am2
)Protein Model on 7am2_LB_1_VB_1
(TEMPLATE: 7am2
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(DDX1_HUMAN) | LB 1 (BW) | polymer(polypeptide(L)) [447 aa] | DEAD/DEAH box helicase-like protein :Q4QHU1_LEIMA | |
| 2 | b | VB 1 (1) | polymer(polyribonucleotide) | Ribosomal RNA | 514R 515T(N) 517I 547G(A) 554R 572T 574V 594D(T) (identity: 62.5 %/36.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7am2_LB_1 identity=36.6% |
queryA 508:QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG: 607
: *** * ** * * ** ** * * * ******* * * * *** * * * ** :
7am2_LB_1 508:RTIIFFRN-IDATTAVFHQLRSAG--------FAVSLLHASLPYKVRKEMYADFASGRTNILCATDVAARGLDLH-VDMVINFDVPTNALAYLSRSGRTA: 597
SecStr :SEEEE S -HHHHHHHHHHHHTTT-------- EEEE TTS HHHHHHHHHHHSSSTTSEEEE TTTTSS SS- EEEESS SSSHHHHHHHTTTS:
ExpBur :bbbbbbee-eeebeebbeebeeee--------bebbbbbeebeeeebeebeebbbebebbbbbbbebbbbebeee-bebbbbbbbbebbbbbbbbbbbbb:
Contact : bb b b b b b b
queryA 608:RAERMGLAISL: 618
:* * * *:
7am2_LB_1 598:RMGREGQVLNL: 608
SecStr : TT EEEEE :
ExpBur :beeeebebbbb:
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[assembly_id:1]
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