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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [218 aa] | Eukaryotic initiation factor 4A-I :IF4A1_HUMAN | |
2 | b | B 1 (A) | non-polymer(SAU) | 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium | 20M(Y) 22W(F) 49G 50S(T) 51G 301Q (identity: 50.0 %/32.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5zbz_A_1 identity=32.0% |
queryA 3:AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102 : * * * ** * * ** * * * * * * * : 5zbz_A_1 15:SFDDMNLSESLLRGIYAYGFEUPSAIQQRAILPCIUGYDVIAQAQSGTGUTATFAISILQ----------------------------------------: 74 SecStr : GGGS HHHHHHHHHHT SS HHHHHHHHHHHTT EEEE TTSSHHHHHHHHHHH----------------------------------------: ExpBur :bbeebebeebbeebbeeeeeeebeebbeebbebbeeeebbbbbbeeeeebbbbbbbbbbe----------------------------------------: Contact : b b bbb queryA 103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202 : : 5zbz_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-------APKALIVEPS: 295 : * ** * : 5zbz_A_1 75:-----------------------------------------------------------------------------------QIELDLUATQALVLAPT: 91 SecStr :-----------------------------------------------------------------------------------H TTS S EEEE SS: ExpBur :-----------------------------------------------------------------------------------bbeeeeebbbbbbbbbb: queryA 296:RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV: 394 :**** * * *** * * * ****** * * ****** ** * * * : 5zbz_A_1 92:RELAQQIQUVVMALGDYMGASCHA---CIGGTNVRAEVQULQMEAPHIIVGTPGRVFDMLNRRYLSPUYIUMFVLDEADEMLSRGFUDQIYDIFQULNSN: 188 SecStr :HHHHHHHHHHHHHHTTTTT EEE---E GGGHHHHHHHHHH SEEEE HHHHHHHHHTTSS TT EEEEESHHHHHHTT HHHHHHHHHHS TT: ExpBur :eebbeebbebbeebbeebebebeb---bbbeeeeebbbeebeeeebbbbbbbbebbbebbeeeebeeeebebbbbbbbbebbeeeeeeebbebbeebeee: Contact : b queryA 395:TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV: 429 :* ** *** * ** * * : 5zbz_A_1 189:T------QVVLLSATMPS-DVLEVTUUFMRDPIRI: 216 SecStr : ------EEEEEES H-HHHHHHHHH SS EEE: ExpBur :b------bbbbbbbebee-ebeebbeebbeebbeb: |