#WARNING:no index is registered index "YP_009725297.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725297.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | KA 1 (j) | polymer(polypeptide(L)) [174 aa] | Nsp1 :A0A088DIE1_9BETC | |
2 | b | B 1 (2) | polymer(polyribonucleotide) | 18S rRNA | 11K 12T 74S(N) 75D(H) 77R(N) 79A(R) 85M(L) 99R 100S 101G 124R 125K(R) 126N(R) 128N(K) 136Y(W) 140L(R) 142S(T) 156D(L) 162N(K) 164K 165H 167S(Q) 168G 169V(N) 171R (identity: 40.0 %/27.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8ppk_KA_1 identity=27.0% |
queryA 8:FNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYVFIKRSDAR-TAPHGHVMVELVAELEGIQYGRSGETLGV: 106 : * *** ** * * * * ** * ** * * * ** ******* * : 8ppk_KA_1 22:LNQKTHFSVELPWIQIGENPIKPWSVTPAEALNTVYAAIAEGKAAFIPPFKGMHKYLPELCVFLVRNHGNPTRPFD--LQELAVREGDVNYGRSGETVGA: 119 SecStr :B TTTEEEEEE B SSSS S HHHHHHHHHHHHHHS EEEE TTHHHHS SEEEEEEEE SSS SB--EEEEEEEETTEE S SSEEEEE: ExpBur :beeebbbebebbebeeeebeeeebeeebeebeeebbebbeeeebbbbeeeeebeeebeebbbbbbeebbeeeeeeb--bbebbbeeeeeeeeeeeeeebb: Contact : bb bb bb b b bbb queryA 107:LVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELM: 174 : ** * * ** * * * * * * ** * * : 8ppk_KA_1 120:IVPLDGQEPYGTITIQLRRRGKNAGGVYAWTNTRDT--VTDDLVHEPIDLYTEDPKGKHAQGNLRKFL: 185 SecStr :EEE TT EEEEEE SS SSSS -- SS HHHHHHH TTSTTSHHHHHHHH: ExpBur :bbbbeebeeeeeeebebeebeeeeeeeebeeeeeee--eeeeeeeeeeeeeeeeeeeeebeebeeeee: Contact : bbb b b b b b b bb bbb b |