[pdbjlvh2]Protein Model on 8fg2_B

Protein Model on 8fg2_B_1 (TEMPLATE: 8fg2 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(NCAP_SARS)	B 1 (B)	polymer(polypeptide(L)) [419 aa]	Nucleoprotein :NCAP_SARS2

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8fg2_B_1 identity=91.2%

queryA         1:MSDNGPQSNQRSAPRITFGGPTDSTDNNQNGGRNGARPKQRRPQGLPNNTASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDG: 100
                :******* *** ********* ***  **** * *** ************************* * ************* ************** *****:
8fg2_B_1       1:MSDNGPQ-NQRNAPRITFGGPSDSTGSNQNGERSGARSKQRRPQGLPNNTASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDG:  99
SecStr          :  SS TT- TTTS TTSSS  SSS S  TTTT        SS TT           EE SS       SSS S   TTT SS   EEEEE  S   S  S:    
ExpBur          :eeeebee-bebbeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebeebebbebbbbeeeebebeeeebbbebebbbeebbbbbbbebeeeeeeeee:    

queryA       101:KMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGTRNPNNNAATVLQLPQGTTLPKGFYAEGSRGGSQASSRSSSRSRGNSRNSTP: 200
                :*** **************** ******* ** ******************** **** **********************************  ******:
8fg2_B_1     100:KMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGSQASSRSSSRSRNSSRNSTP: 199
SecStr          :SGGGS  EEEEEETT SSTT  SSS SSSEE     TT      STTTS  TTS S       SSS   TT B     TTT  SS   TTS  S SS   :    
ExpBur          :eeeebbebbebbbbbbbeeebeeebeeeeebeebbeeebebbeeeebbbeeeeeeebbbbbbbbbeebeeebbbbbbeeeebeebeebbeeeeeeebbbb:    

queryA       201:GSSRGNSPARMASGGGETALALLLLDRLNQLESKVSGKGQQQQGQTVTKKSAAEASKKPRQKRTATKQYNVTQAFGRRGPEQTQGNFGDQDLIRQGTDYK: 300
                :***** ******  **  **************** ******************************** ********************** *********:
8fg2_B_1     200:GSSRGTSPARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGNFGDQELIRQGTDYK: 299
SecStr          :  SS   S SSSSSSTTTTTHHHHHHHHHHHHHH   TT S       S  SSGGGGS GGG   BTTB HHHHS S SS SSS SB  HHHHHH TT T:    
ExpBur          :bbeebebeeeebbebeebbbbbbbbbbbbebbbebbbeebeebbbebeeeeeeebbeebbeebebeeebebbbbebbbeeeebbbebbbbbbbbeebebe:    

queryA       301:HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYHGAIKLDDKDPQFKDNVILLNKHIDAYKTFPPTEPKKDKKKKTDEAQPLPQRQKKQPTVTLLPAAD: 400
                :********************************** ********** *** ************************** ** * ******** *********:
8fg2_B_1     300:HWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAAD: 399
SecStr          :THHHHTTSS  HHHHTTTS  EEE  TTSSEEE        TTSTTHHHHHHHHHHHBTGGGGSTTTSS     TT      SS  S S   STT  TTH:    
ExpBur          :bbeebeebeeeeeebeeebeeeeeeeebeebbbbeeeeeeeeeeeebeebbbbbeebeebbebbeeeeeeeeebeeeeeeeeeeeeeeeebeeeebebbb:    

queryA       401:MDDFSRQLQNSMSGASADSTQA: 422
                : **** *** ***  *******:
8fg2_B_1     400:LDDFSKQLQQSMS--SADSTQA: 419
SecStr          :HHHHHHHHHHHHH--HHHSS  :    
ExpBur          :bbbebbbeeeeeb--eeeeeeb:

Protein Model on 8fg2_B_1 (TEMPLATE: 8fg2 )

Input Residue Numbers for Focused Sites