Protein Model on 4lmc_A_1_B_1
(TEMPLATE: 
4lmc
)Protein Model on 4lmc_A_1_B_1
(TEMPLATE: 4lmc
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NCAP_SARS) | A 1 (A) | polymer(polypeptide(L)) [132 aa] | Nucleoprotein :Q6SA23_CVHOC | |
| 2 | b | B 1 (A) | non-polymer(C5P) | CYTIDINE-5'-MONOPHOSPHATE | 52S 54F 56A(G) 108R 110Y 112Y 150R 157A 175E (identity: 88.9 %/47.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4lmc_A_1 identity=47.6% |
queryA 52:SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGA-LNTPKDHIG: 148
:*** ** * * * ****** ** * ** ** * ************ * ** * *** * *** * * :
4lmc_A_1 9:SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRWYFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IV: 107
SecStr : SB EEE STT TT TT GGG EEEEEEE S --- EEEEEETT GGGTTS TT TTEEEEE TT TTS - :
ExpBur :bbbbbbbbeeeeeebebeeeebbbebeeeeeebbbbbbeebeeeeeeeeee---eeebebbbbbbebbebeeeebeeeeebbebbbbeebeeeeebe-be:
Contact :b b b b b b
queryA 149:TRNPNNNAATVLQLPQGTTLPKGFYAEG: 176
: * * * * ** ** * * **:
4lmc_A_1 108:DRDPSSDEAIPTRFPPGTVLPQGYYIEG: 135
SecStr : STTS B TT TTEEE :
ExpBur :ebeeeeeeeeebebeeebeebebbebee:
Contact : b b b
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[assembly_id:1]
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