Protein Model on 6lnn_D_1_B_1
(TEMPLATE: 
6lnn
)Protein Model on 6lnn_D_1_B_1
(TEMPLATE: 6lnn
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(NCAP_SARS) | D 1 (D) | polymer(polypeptide(L)) [111 aa] | Nucleoprotein :A0A2I2MQD0_9BETC | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [128 aa] | Nucleoprotein :A0A2I2MQD0_9BETC | 53W 54F(Y) 76N 78N 79S 80G(T) 83D(Q) 113Y 145D(T) 147I(F) 149T 151N 155N(D) 158T(I) (identity: 50.0 %/54.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6lnn_D_1 identity=54.8% |
queryA 50:TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGT: 149
:* ** * ****** * ** ***** * ** * ** ** ******* ****** ** * * ***** ** * **:
6lnn_D_1 5:TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXAPRWYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGT: 102
SecStr : B SB EEE SS TT TTS GGG EEEEEE -------------- EEEEEETT STTTTS TT TTEEEEE TT SS S-S :
ExpBur :eebebbbbbbeeeeebebeeeebbbeeeebeeeebbbbbeee--------------eeebebbbbebbebeebebebeeebbbbbbeeebeeeeee-eee:
Contact : bb b bbb b b b b b
queryA 150:RNPNNNAATVLQLPQGTTLPKGFYAE: 175
:***** * * * ** *** * *:
6lnn_D_1 103:RNPNNDSAIVTQFAPGTKLPKNFHIE: 128
SecStr :B TTT B TT TTEEE :
ExpBur :beeeeeeeeebebeeebeebeebeee:
Contact : b b b
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[assembly_id:2]
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