Protein Model on 6kl6_C_1_A_1 (TEMPLATE: 6kl6 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(NCAP_SARS) C 1 (C) polymer(polypeptide(L)) [109 aa] Nucleoprotein :A0A0D3MU65_9BETC
2 b A 1 (A) polymer(polypeptide(L)) [117 aa] Nucleoprotein :A0A0D3MU65_9BETC 53W 76N 78N 80G(T) 113Y 145D(T) 147I(F) 148G 149T 151N 155N(D) (identity: 63.6 %/54.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6kl6_C_1 identity=54.4%
queryA        50:TASWFTALTQHGKEELRFPRGQGVPINTNSGPDDQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGALNTPKDHIGT: 149
                :* ** * ******  * ** ***** * ** *    ** **                ******* ****** **  * * *****   **   *    **:
6kl6_C_1      19:TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXXPRWYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGT: 116
SecStr          : B SB  EE  SS      TT      TT  GGG EEEEEE --------------- EEEEEETT STTTTS TT   TTEEEEE TT  SS  S-S  :    
ExpBur          :eebebbbbbbeeeeebebeeeebbbeeeebeeeebbbbbeee---------------eebebbbbebbebeebeeeeeeebbbbbeeeeeeeeeee-eee:    
Contact         :   b                      b b b                                b                               b bbb

queryA       150:RNPNNNAATVLQLPQGTTLPKGFYAEG: 176
                :*****  * * *   ** **  *  **:
6kl6_C_1     117:RNPNNDSAIVTQFAPGTKLPXXFHIEG: 143
SecStr          :B TTT   B     TT    -- EE  :    
ExpBur          :beeeeeeeeebebeeebeee--eeebe:    
Contact         : b   b                                                                                              


Input Residue Numbers for Focused Sites

ex) 2,15,123