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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NCAP_SARS) | A 1 (A) | polymer(polypeptide(L)) [133 aa] | Nucleoprotein :Q6SA23_CVHOC | |
2 | b | B 1 (A) | non-polymer(TRS) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | 73V 74P 75I 76N(A) 79S(V) 80G(P) 81P(A) 84Q(A) 113Y (identity: 44.4 %/48.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4j3k_A_1 identity=48.0% |
queryA 52:SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGA-LNTPKDHIG: 148 :*** ** * * * ****** ** * ** ** * ************ * ** * *** * *** * * : 4j3k_A_1 9:SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRWYFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IV: 107 SecStr : SB EEE STT TT TT GGG EEEEEEE S --- EEEEEETT GGGTTS TT TTEEEEE TT TTS S- : ExpBur :bebbbbbbeeeeeebebeeeebbbebeeeeeebbbbbbeebeeeeeeeeee---eebbbbbbbbbebbeeeeeeeeeeeebbebbbbeebeeeeebe-ee: Contact : bbbb bbb b b queryA 149:TRNPNNNAATVLQLPQGTTLPKGFYAEGS: 177 : * * * * ** ** * * ***: 4j3k_A_1 108:DRDPSSDEAIPTRFPPGTVLPQGYYIEGS: 136 SecStr : STT B TT TTEEETT : ExpBur :ebeeeeeeeeebebeeebeebebbebeee: |