Protein Model on 8ifp_A_1_B_1
(TEMPLATE: 
8ifp
)Protein Model on 8ifp_A_1_B_1
(TEMPLATE: 8ifp
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(R1A_SARS2) | A 1 (A) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase nsp5 :R1A_SARS2 | |
| 2 | b | B 1 (A) | non-polymer(OZ6) | (1R,2S,5S)-3-[(2S)-2-(tert-butylcarbamoylamino)-3,3-dimethyl-butanoyl]-6,6-dimethyl-N-[(2S)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-3-azabicyclo[3.1.0]hexane-2-carboxamide | 3304H 3312M 3317Y 3403F 3404L 3405N 3406G 3408C 3426H 3427H 3428M 3429E 3430L 3431P 3435H 3450D 3451R 3452Q 3453T 3455Q (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8ifp_A_1 identity=100.0% |
queryA 3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK:3363
:****************************************************************************************************:
8ifp_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTTTTS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT E:
ExpBur :eebeeeebebeebeebbbbbbbeebebbbbbbeebbbbbbbbbbeeeeeeebebeebbeeeeeeebebebeeeebebebeeeeebbbebebeeebeeebe:
Contact : b b b
queryA 3364:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI:3463
:****************************************************************************************************:
8ifp_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEEETTTEEEEE TTS BSSS SSSS B :
ExpBur :ebeeebeebebbbbbbbeebeeeeeebbbbbebebbeeebeeebbbbbbbebeeeebebbbbbbbebeeebbbbbbbebebbeebebeeeeeeeeeebeb:
Contact : bbbb b bbbbbb b bbbb b
queryA 3464:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC:3563
:****************************************************************************************************:
8ifp_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHH:
ExpBur :bbbbbbbbbbbbeeeebebeeeeebeeeebeebbeeeebbebeeeebeebeebbeeeebebeebbbbbeebbeeebeeeebeebeebebbbbbebbebbe:
queryA 3564:SGVTF:3568
:*****:
8ifp_A_1 301:SGVTF: 305
SecStr :HT :
ExpBur :eeeee:
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[assembly_id:1]
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