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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | A 1 (A) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase nsp5 :R1A_SARS2 | |
2 | b | C 1 (A) | non-polymer(LQZ) | 2-(diethylamino)-N-(2,6-dimethylphenyl)ethanamide | 3361T 3362P 3363K 3364Y 3365K (identity: 100.0 %/99.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8h6n_A_1 identity=99.7% |
queryA 3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK:3363 :******************** *******************************************************************************: 8h6n_A_1 1:SGFRKMAFPSGKVEGCMVQVICGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100 SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTGGGS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S: ExpBur :eebeeeebebeebeebbbbbebeebebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebebeeeebebebeeeeebbbebebeeebeeebe: Contact : bbb queryA 3364:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI:3463 :****************************************************************************************************: 8h6n_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200 SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEEETTTEEEEE TTS BSSS SSSS B : ExpBur :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbebebebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb: Contact :bb queryA 3464:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC:3563 :****************************************************************************************************: 8h6n_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300 SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHH: ExpBur :bbbbbbbbbbbbeeeebebeeeeebeeeebbebbeeeebeebeeeebeebeebbeeeebebeebbbbbbebbeeebeeeebeeeeeeebbbbbebbebbe: queryA 3564:SGVTFQ:3569 :******: 8h6n_A_1 301:SGVTFQ: 306 SecStr :HT : ExpBur :eeeeee: |