[pdbjlvh2]Protein Model on 8cx9_D_1_V

Protein Model on 8cx9_D_1_V_1 (TEMPLATE: 8cx9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS2)	D 1 (D)	polymer(polypeptide(L)) [310 aa]	Papain-like protease nsp3 :R1A_SARS2
2	b		V 1 (D)	non-polymer(BR)	BROMIDE ION	1580H 1624D 1626T (identity: 100.0 %/99.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8cx9_D_1 identity=99.7%

queryA      1567:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS:1666
                :****************************************************************************************************:
8cx9_D_1       9:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 108
SecStr          : EEEEEESSSSS EEEEE SSS HHHHHSSEEETTEE TT    TTTSS EEEE   SHHHHHHHHHHH    SSSHHHHHHHHHHHTTS   EETTEE :    
ExpBur          :ebebebbbbeeeeeeeebeeeebbbeebeebbbebeebeeeebeeeeeebebbbebeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebbb:    
Contact         :             b                                           b b                                        

queryA      1667:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE:1766
                :***************************************************************************************** **********:
8cx9_D_1     109:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCXQQQTTLKGVE: 208
SecStr          :    SSTHHHHHHHHHHTTS   BSSHHHHHHHHHHTTT  HHHHHHHHHHTT  TT    HHHHHHHHHTTB  SS EEEEEEE TT - EEEEEESGG:    
ExpBur          :beeeeebbbbbbbbbbbbebebebebebbeebbeebeeeebbebbbbbbbbbeeebeeeeebeebbeebbeebebeebebbbeeebeee-eeeeeeebbe:    

queryA      1767:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV:1866
                :****************************************************************************************************:
8cx9_D_1     209:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV: 308
SecStr          :GTEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEE SBTTB  EEEEE SSS EEEETTEEEE SSEEEEEEEE:    
ExpBur          :bbbbeebbbbeebeebbeeebeeeeebeeebbebbbebbbbbbeeeeeebeeeebebbbbeeeeeeeeebebbbeeeebbbbebeeeeeeeebebebbbb:    

queryA      1867:FYKENSYTTTI:1877
                :***********:
8cx9_D_1     309:FYKENSYTTTI: 319
SecStr          :EEE   EE   :    
ExpBur          :bbebeeeebee:

Protein Model on 8cx9_D_1_V_1 (TEMPLATE: 8cx9 )

Input Residue Numbers for Focused Sites