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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | B 1 (A) | polymer(polypeptide(L)) [314 aa] | Papain-like protease nsp3 :R1A_SARS2 | |
2 | b | P 1 (A) | non-polymer(BR) | BROMIDE ION | 1814Y 1820T 1868Y (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8cx9_B_1 identity=100.0% |
queryA 1565:VRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGL:1664 :****************************************************************************************************: 8cx9_B_1 7:VRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGL: 106 SecStr : EEEEEEESSSSS EEEEEESSS HHHHTSSEEETTEE TT GGGTT EEEE SHHHHHHHHHHH TTSHHHHHHHHHHHTTS EETTE: ExpBur :eeebebebbbbeeeeeeeebeeeebbeeebeebbeebeebeeebbeeebeeeebbbebeeeebeebbeebbeeeeeebbeebbebbeebeebbbeebeeb: queryA 1665:TSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG:1764 :****************************************************************************************************: 8cx9_B_1 107:TSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG: 206 SecStr :E TTTHHHHHHHHHHTTS BSSHHHHHHHHHHTTT HHHHHHHHHHTT TT HHHHHHHHHTTB SS EEEEEEEETTTEEEEEEEES: ExpBur :bbbeeeeebbbbbbbbbbbbebebebebebbeebbeebeeeebbebbbbbbbbbebebeeebebeebbeebbeebebeebebbbbbebeeeeeeeeeeeb: queryA 1765:VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPIT:1864 :****************************************************************************************************: 8cx9_B_1 207:VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPIT: 306 SecStr :GGGSEEES S HHHHHH EEEE SSSSEEEEEEEEEE SEEEEEEEEEEEEE TTS SEEEEE SBTTB EEEEEESSSEEEEETTEEEE S EEEEEE: ExpBur :bebbbbeebbebeebbebbeeebeeeeebebbbbebebebbbbbbeeeeeebbeeebebbbbbeeeeeebebebbbbeeebbbbebeeeeeeeebebebb: Contact : b b queryA 1865:DVFYKENSYTTTIK:1878 :**************: 8cx9_B_1 307:DVFYKENSYTTTIK: 320 SecStr :EEEEE SEEE : ExpBur :bbbbebeebebeee: Contact : b |