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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | A 1 (A) | polymer(polypeptide(L)) [312 aa] | Papain-like protease nsp3 :R1A_SARS2 | |
2 | b | G 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 1811P 1827Y 1829G 1830N 1831Y (identity: 100.0 %/99.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7uv5_A_1 identity=99.4% |
queryA 1567:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS:1666 :****************************************************************************************************: 7uv5_A_1 7:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 106 SecStr : EEEEEESSSSS EEEEE TTS HHHHHSSEEETTEE TT GGGTT EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS EETTEE : ExpBur :ebebbbbbbeeeeeeeebeeeebbeeebeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbeebbebbeebeebebeebeebbb: queryA 1667:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE:1766 :******* ********************************************************************************************: 7uv5_A_1 107:IKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 206 SecStr : S TT HHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHHT TT HHHHHHHHHTTB TT EEEEEEEETTTEEEEEEEEGGG: ExpBur :beeeeebbbbbbbbbbbbebeeebebebbeebbeebeeeebbbbbbbbbbbbebebeeeeebeebbeebbeebebeebebbbbbebeeeeeeeeeeebbe: queryA 1767:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV:1866 :********************************************************************************** *****************: 7uv5_A_1 207:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCINGALLTKSSEYKGPITDV: 306 SecStr :GTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEEEEE: ExpBur :bbbeeebbebeebbebbeeebeeeeebeebbbebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebebbbbeeebbbbebeeeeeeeebebbbbbb: Contact : b b bbb queryA 1867:FYKENSYTTTIK:1878 :************: 7uv5_A_1 307:FYKENSYTTTIK: 318 SecStr :EEE SEEE : ExpBur :bbebeebebeee: |