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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | A 1 (A) | polymer(polypeptide(L)) [313 aa] | Papain-like protease :R1A_SARS2 | |
2 | b | B 1 (A) | non-polymer(9EI) | 5-amino-N-(naphthalen-1-yl)pyridine-3-carboxamide | 1726G 1727D 1771M 1810P 1827Y 1831Y 1832Q 1836Y (identity: 100.0 %/99.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7sgu_A_1 identity=99.7% |
queryA 1566:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT:1665 :****************************************************************************************************: 7sgu_A_1 6:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT: 105 SecStr : EEEEEEESSSSS EEEEEETTS HHHHHSSEEETTEE TT GGGTT EEEE SHHHHHHHHHHH TTHHHHHHHHHHHHTTS EETTEE: ExpBur :eebebbbbbbeeeeeeeebebeebbeeebeebbbebeebeeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebb: queryA 1666:SIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV:1765 :******** *******************************************************************************************: 7sgu_A_1 106:SIKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV: 205 SecStr : TTTHHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHTT TT HHHHHHHHHTTB TT EEEEEEEETTTEEEEEEEEGG: ExpBur :bbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbebebeeeeebeebbbebbeebebeebebbbbeebeeeeeeeeeeebb: Contact : bb queryA 1766:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD:1865 :****************************************************************************************************: 7sgu_A_1 206:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD: 305 SecStr :GGTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEESSTTT EEEEEEESSSEEEEETTEEEEESEEEEEEEE: ExpBur :ebbbbeebbbbeebbebbeeebeeeeebeebbbebebebbbbbbeeeeeebeeeebbbbbbbeeeeeebebebbbbeebbbbbbbeeeeeeeebebbbbb: Contact : b b b bb b queryA 1866:VFYKENSYTTTIK:1878 :*************: 7sgu_A_1 306:VFYKENSYTTTIK: 318 SecStr :EEEE SEEE : ExpBur :bbbebeeeebeee: |