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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | C 1 (C) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | |
2 | b | I 1 (C) | non-polymer(YVV) | N-{3-[(prop-2-yn-1-yl)oxy]propanoyl}-D-phenylalanyl-N-{(2R)-5-ethoxy-5-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]pentan-2-yl}-L-phenylalaninamide | 3304H 3312M 3317Y 3403F 3404L 3405N 3406G 3407S 3408C 3426H 3427H 3428M 3429E 3431P 3435H 3450D 3451R 3452Q 3453T 3454A (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7mb3_C_1 identity=100.0% |
queryA 3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK:3363 :****************************************************************************************************: 7mb3_C_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100 SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTGGGS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT E: ExpBur :eebeeeebebeebeebbbebbbeebebbbbbbeebbbbbeebbbeeeebeebebeebbeebeeeebebebeeeebbbebeeeeebbbebebeeebeeebe: Contact : b b b queryA 3364:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI:3463 :****************************************************************************************************: 7mb3_C_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200 SecStr :EEE TT EEEEEEEETTEEEEEEEEEB TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSTT SSSS B : ExpBur :eebeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeeebbbbbbebebbeebebeeeebebeeeeeb: Contact : bbbbbb bbbb b b bbbbb queryA 3464:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC:3563 :****************************************************************************************************: 7mb3_C_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300 SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHH: ExpBur :bbbbbbbbbbbbebeeeebeeeeebeeeebeebbeeeebeebeeeebeebeebbeebebebeebbbbbeebbeeebeeeebeebeebebbbbbebbebbe: queryA 3564:SGVTF:3568 :*****: 7mb3_C_1 301:SGVTF: 305 SecStr :HT : ExpBur :eeeee: |