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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | A 1 (A) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | |
2 | b | C 1 (A) | non-polymer(AG7) | 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER | 3288T 3289T 3290L 3302P 3304H 3403F 3404L 3405N 3406G 3407S 3408C 3426H 3427H 3428M 3429E 3430L 3431P 3435H 3455Q (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7l8i_A_1 identity=100.0% |
queryA 3264:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK:3363 :****************************************************************************************************: 7l8i_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100 SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG SGGGTS HHHHHHHS GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S: ExpBur :eebeeeebebeebeebbbebebeeeebbbbbbeeebbbbeebbbeeebeeeeebeebbeebeeeebebbbeeeebebebeeeeebbbebebeeebeeebe: Contact : bbb b b queryA 3364:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI:3463 :****************************************************************************************************: 7l8i_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200 SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B : ExpBur :ebeeebeebebbbbbbbbebeeeeeebbbbbebebbeeebeeebebbbbbbbeeeebbbbbbbbbebeeebbbbbbbebebbeebebbeeeeeeeeeeeb: Contact : bbbbbb bbbbbb b b queryA 3464:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC:3563 :****************************************************************************************************: 7l8i_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300 SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHGGGTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS HHHHHHHT: ExpBur :bbbbbbbbbbbbebeebebeeeeebebeebbeebeeeebbebeeebbeebeebbeeeeeebebbbbbbbebbeeebeeeebeebeebebebbbebbebbe: queryA 3564:SGVTF:3568 :*****: 7l8i_A_1 301:SGVTF: 305 SecStr :TT : ExpBur :eeeee: |