[pdbjlvh2]Protein Model on 7d7k_A_1_M

Protein Model on 7d7k_A_1_M_1 (TEMPLATE: 7d7k )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS2)	A 1 (A)	polymer(polypeptide(L)) [312 aa]	Non-structural protein 3 :R1AB_SARS2
2	b		M 1 (A)	non-polymer(SO4)	SULFATE ION	1856S 1857S (identity: 100.0 %/99.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7d7k_A_1 identity=99.7%

queryA      1567:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS:1666
                :****************************************************************************************************:
7d7k_A_1       1:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 100
SecStr          : EEEEEESSSSS EEEEE TTS HHHHHSSEEETTEE TT    GGGTT EEEE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHTTS   EETTEE :    
ExpBur          :ebebebbbbeeeeeeeebeeeebbeeebeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebbb:    

queryA      1667:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE:1766
                :******* ********************************************************************************************:
7d7k_A_1     101:IKWADNNSYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 200
SecStr          :    TTTHHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHTT  TT    HHHHHHHHHHTBS TT EEEEEEEETTTEEEEEEEETHH:    
ExpBur          :beebeebbbbbbbbbbbbebebebebebbbebbeebeebebbbbbbbbbbbbebebeeebebeebbeebbeebebeebebbbbeebeeeeeeeeeeebbe:    

queryA      1767:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV:1866
                :****************************************************************************************************:
7d7k_A_1     201:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV: 300
SecStr          :HHEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEE SSSEEEEEEEESSSEEEEETTEEEEES EEEEEEEE:    
ExpBur          :bbbbeebbebeebbebbeeebeeeeebeebbbebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebebbbbeebbbbbebeeeeeeeebebbbbbb:    
Contact         :                                                                                         bb         

queryA      1867:FYKENSYTTTIK:1878
                :************:
7d7k_A_1     301:FYKENSYTTTIK: 312
SecStr          :EEE SEEE    :    
ExpBur          :bbebeeeebeee:

Protein Model on 7d7k_A_1_M_1 (TEMPLATE: 7d7k )

Input Residue Numbers for Focused Sites