Protein Model on 8tur_A_1_B_1
(TEMPLATE: 
8tur
)Protein Model on 8tur_A_1_B_1
(TEMPLATE: 8tur
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [425 aa] | Importin subunit alpha-1 :IMA1_MOUSE | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [18 aa] | Truncated large T antigen :M4VRX3_9POLY | 104L 105S 106R 138F 142W 146N 148A 149S 150G 151T 152S 155T 181Q 184W 187G 188N 191G 192D 231W 235N 238R 270D 273W 277Y 281G 283N 286I 307L 308P 311T 315R 319N 321V 322T 323G 328T 348K 354E 357W 360S 361N 364A 396E 399W 403N 406S (identity: 100.0 %/94.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8tur_A_1 identity=94.4% |
queryA 72:GTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL: 171
:******* ******** * * ************************************* *****************************************:
8tur_A_1 53:GTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL: 152
SecStr : SS HHHHHHHHHSS HHHHHHHHHHHHHHHTSSS HHHHHHTT HHHHHHHTT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHT:
ExpBur :ebeeeebeebeebbeeeeeeebbebbebbeebbeeeeeebbeebeeeebbeebbebbeeeebeebbbbbbebbbbbbeeeeebbebbbeeebbebbbebb:
Contact : bbb b b b bbbbb b
queryA 172:ASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADT: 271
:*********************** ******* ** *********** * ************************* **************** ******* :
8tur_A_1 153:ASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADS: 252
SecStr :T SSHHHHHHHHHHHHHHHHT HHHHHHHHHTT HHHHHHHT SS GGGS HHHHHHHHHHHHHHT TT HHHHHHHHHHHHHHHT S HHHHHHH:
ExpBur :ebeeeebbebbbebbbbbbeebeebbeebbeeebbeebbeebeeeebeeeeeebbebbbebbbbbbeeeeeebeeebbeebbebbeebbebebeebbbeb:
Contact : b b bb bb b b b b
queryA 272:CWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQ: 371
:*************** **** ************ ************************ *****************************************:
8tur_A_1 253:CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQ: 352
SecStr :HHHHHHHHSS HHHHHHHHTTT HHHHHHHHT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTGGGGHHHHTT SSHHHHHHHHHHHHHHHTS HHHHH:
ExpBur :bebbbbbbeeeeebbebbbeeebbebbbebbebeeeebbbbbbebbbbbbebeeebbbebbeeebbeebeebbeeeeeebbebbbebbbebbebeeebbe:
Contact : b b b b b bb b b b bbb b b b b bb b
queryA 372:QVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLD: 471
:************ ************* ** **************************** ******* *********************************:
8tur_A_1 353:QVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLD: 452
SecStr :HHHHTT HHHHHHHHHSS HHHHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHHHHHHHT HHHHHHHHHHTTHHH:
ExpBur :ebbeeebbeebbebbeeeeeebbbebbebbbebbeebeeebbeebbeeebbebbbebbebeeeebbebbbebbebbbebbeeeeeeeebbeebeebebee:
Contact : b b b b
queryA 472:KIEALQNHENESVYKASLSLIEKYF: 496
:****** *********** ******:
8tur_A_1 453:KIEALQRHENESVYKASLNLIEKYF: 477
SecStr :HHHHHTT SSHHHHHHHHHHHHHH :
ExpBur :ebeebbeeeeeebeeebeebbeebe:
|
[assembly_id:1]
[help]