[pdbjlvh2]Protein Model on 7sqc_BE_1_IJ

Protein Model on 7sqc_BE_1_IJ_1 (TEMPLATE: 7sqc )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	BE 1 (G1)	polymer(polypeptide(L)) [466 aa]	PF16 :A0A2K3DEG1_CHLRE
2	b		IJ 1 (T0)	polymer(polypeptide(L)) [542 aa]	FAP47 :A0A2K3CP55_CHLRE	95Q 96A 99A(F) 129G(E) 130R(E) 131T(F) 132D 139E(A) 142W 169S(L) 170L(C) 172A(Q) 173S(E) 174P 175H(E) 180E(R) 184W(S) 187G(S) 188N(D) 191G(K) 192D(H) 216P(Q) 217D 219S(K) 227R 228N(Q) 231W(C) 263D(P) 266E(F) 307L(G) 308P(N) 348K(E) 349T(D) 350N(H) (identity: 20.6 %/25.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7sqc_BE_1 identity=25.2%

queryA        75:NWSVDDIVKGINSSNVENQL------------QATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGG: 162
                :* * **            **            **         *         *  *     *  *   *       *** *  **    *    *** *:
7sqc_BE_1     70:NYS-DDLAEAVVQNEILPQLVYSLSEQNRFYKQAAAFCLRAVARHSPELAQSVIDSGALDSLVTCLEEFD-PGVKEASAWTLGYIAGHNAELAQQVVDAG: 167
SecStr          :HH -HHHHHHHHHTT HHHHHGGGTT  HHHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHHHHSS -HHHHHHHHHHHHHHHTS HHHHHHHHHSS:    
ExpBur          :eee-eebbeebbeeebbeebbebbeeeeeebbebbbbbbbbbbeebeebbeebbebebbebbbebbebeb-eebbbbbbebbbebbeeeeebbeebeebe:    
Contact         :                             b  bb  b                             bbbb      b  b                    

queryA       163:AIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHH: 262
                :* *        *       *  **  *          *   ***  *  *    *         *     **                 * *     *  :
7sqc_BE_1    168:AVPLLVLCVQEPELSLKRIAASALSDISKHTPELAQAVVDAGAVAYLAPLVINQDAK-----LKRQVCCALSQIAKHSVDLAEVVVGAEIFPKILTCLKF: 262
SecStr          : HHHHHHHTTSS HHHHHHHHHHHHHHHTS HHHHHHHHHHTHHHHHSGGGT   HH-----HHHHHHHHHHHHHSS HHHHHHHHHT  HHHHHHHTSS:    
ExpBur          :bbeebbebbeeeeeebbebbbbbbbbbbeeeeebbebbbeeebbeebbebbeeeeee-----bbbebbbbbbebbebeeebbeebbeeebbeebeebbeb:    
Contact         :      bb bbbb    b   b  bb  bb                       bb b       bb  b                               

queryA       263:DDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTN-PKTNIQKEATWTMSN: 361
                : *  *                *    **  * *  **     *      *   * * *          **   **    * *   *         **   :
7sqc_BE_1    263:PDEFVKKHSATVVREVAKHTPELAQLVVGNGGVGALVDYISDSAGNNRLPGIMALGYIAAFSETLALSVIAEKALPPLVSALNEEPEDHLKSATAWTLGQ: 362
SecStr          :S HHHHHHHHHHHHHHHTT HHHHHHHHHHTHHHHHHHHHHH  HHHHHHHHHHHHHHHHH HHHHHHHHHTT HHHHHHHHHT   HHHHHHHHHHHHH:    
ExpBur          :eeeebbeebbbbbbbbbebeeebbeebeeeebbbbbbebbeebeeebbbbbbbbbbebbeeeeebbeebbeeebbebbbebbeeeeeeebbbbbbebbbb:    
Contact         :b  b                                        bb                                        bbb           

queryA       362:ITAGRQDQIQQVVNHGLVPFLVSV----LSKADFKTQ: 394
                :*     *    *   *    ***      *  * ** :
7sqc_BE_1    363:IGRXXPDHAKAVADTGCLATLVSLEXXXASSDDLKTK: 399
SecStr          :HH -- HHHHHHHHHTHHHHHHH  --- HHHHHHHH:    
ExpBur          :bbe--eebbeebeeeebbebbeeee---eebeeebee:

Protein Model on 7sqc_BE_1_IJ_1 (TEMPLATE: 7sqc )

Input Residue Numbers for Focused Sites