[pdbjlvh2]Protein Model on 7n6g_K_1_YF

Protein Model on 7n6g_K_1_YF_1 (TEMPLATE: 7n6g )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	K 1 (0O)	polymer(polypeptide(L)) [499 aa]	PF16 :A0A2K3DEG1_CHLRE
2	b		YF 1 (6D)	polymer(polypeptide(L)) [801 aa]	FAP69 :A0A2K3DWV9_CHLRE	129G(E) 169S(L) 172A(Q) 257V(L) 292T(N) 325D(E) 329Q(L) 333D(A) 366R(T) 368D (identity: 10.0 %/25.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7n6g_K_1 identity=25.2%

queryA        75:NWSVDDIVKGINSSNVENQL------------QATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGG: 162
                :* * **            **            **         *         *  *     *  *   *       *** *  **    *    *** *:
7n6g_K_1      70:NYS-DDLAEAVVQNEILPQLVYSLSEQNRFYKQAAAFCLRAVARHSPELAQSVIDSGALDSLVTCLEEFD-PGVKEASAWTLGYIAGHNAELAQQVVDAG: 167
SecStr          :HH -HHHHHHHHHHTHHHHHHGGGS S HHHHHHHHHHHHHHHHH HHHHHHHHHHS THHHHHHHHSSS-TTHHHHHHHHHHHHHHH HHHHHHHHHTT:    
ExpBur          :eee-eebbebbeebebbebbbebeeeebeebbebbbebbbbbbebbeebbeebbeebebebbbebbebee-ebbbbbbbebbbebbeeeeebbeebeebe:    
Contact         :                                                                  b                                 

queryA       163:AIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHH: 262
                :* *        *       *  **  *          *   ***  *  *    *         *     **                 * *     *  :
7n6g_K_1     168:AVPLLVLCVQEPELSLKRIAASALSDISKHTPELAQAVVDAGAVAYLAPLVINQDAK-----LKRQVCCALSQIAKHSVDLAEVVVGAEIFPKILTCLKF: 262
SecStr          :HHHHHHHHHHSS HHHHHHHHHHHHHHHHH HHHHHHHHHHTHHHHHHHHHHSS HH-----HHHHHHHHHHHHHHH HHHHHHHHHHT HHHHHHHHS :    
ExpBur          :bbebbbebbeeeeeebbebbbbbbbebbeeeeebbeebbeeebbeebbebbeeeebe-----bbbebbbbbbebbeeeeebbeebbeeebbeebeebbee:    
Contact         :      b  b                                                                                    b     

queryA       263:DDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTN-PKTNIQKEATWTMSN: 361
                : *  *                *    **  * *  **     *      *   * * *          **   **    * *   *         **   :
7n6g_K_1     263:PDEFVKKHSATVVREVAKHTPELAQLVVGNGGVGALVDYISDSAGNNRLPGIMALGYIAAFSETLALSVIAEKALPPLVSALNEEPEDHLKSATAWTLGQ: 362
SecStr          :SSHHHHHHHHHHHHHHHHH HHHHHHHHHHTHHHHHHHHHHHS HHHHHHHHHHHHHHHHH HHHHHHHHHHT HHHHHHHHHH   HHHHHHHHHHHHH:    
ExpBur          :eeeebbeebbbbbbbbbbbbeebbeebeeeebbeebbebbeebebebbbbbbebbbebbeebeebbebbeeeebbebbbebbeebeeeebbbbbbbbbbb:    
Contact         :                             b                                b   b   b                             

queryA       362:ITAGRQDQIQQVVNHGLVPFLVSVLSKA----DFKTQ: 394
                :*     *    *   *    ***  *      * ** :
7n6g_K_1     363:IGRHTPDHAKAVADTGCLATLVSLESDGASSDDLKTK: 399
SecStr          :HHHH HHHHHHHHHHTHHHHHHHHHHH   TTTHHHH:    
ExpBur          :bbeeeeebbeebbeeebbebbbebbeeeebeeebeeb:    
Contact         :    b b

Protein Model on 7n6g_K_1_YF_1 (TEMPLATE: 7n6g )

Input Residue Numbers for Focused Sites