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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [239 aa] | YIII(Dq.V2)4CqI | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [240 aa] | YIII(Dq.V2)4CqI | 264D 266E(Q) 306E(S) 308P(E) 348K(S) 350N(E) 390D(S) 392K(E) 435K(E) (identity: 11.1 %/34.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5mfi_A_1 identity=34.9% |
queryA 253:LPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQ: 352 :** * * * * * * ** * * ***** * ** ** * ** * * **** ** : 5mfi_A_1 6:LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVI: 105 SecStr :HHHHHHGGG S HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHHH HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHHHHS HHHH: ExpBur :beebbeebebeeeeebbebbeebbebbeeeeeebeebbeeebbeebbebbeeeeeebbbbbbebbbbbbebeeebbeebbeeebbebbbebbeebeeebb: Contact : b b b b b b queryA 353:KEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAE: 452 : ** * ** * *** * ** * * ***** * ** *** * * ** ** * ** ** : 5mfi_A_1 106:QEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNN-EQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIAS---: 201 SecStr :HHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHHHS HHHHHHHHHHHHHHTTS H-HHHHHHHHTT HHHHHHHTT S HHHHHHHHHHHHHHHT---: ExpBur :ebbbebbbbbbebeeebbeebbeeebbebbbebbeebeeebbeebbebbbbbbebee-ebbeebbeeebbebbbebbebebeebbebbbebbbbbbe---: Contact : b b b queryA 453:KLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFS: 497 : * * ** * * ** ** * * * *: 5mfi_A_1 202:--GNNEQIQ-KLEEAGAEPALEKLQSSPNEEVQKNAQAALEALNS: 243 SecStr :--S HHHHH-HHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHT : ExpBur :--beeebbe-ebeeeebeebbeebeebeeeebeeebeebbebbee: |