[pdbjlvh2]Protein Model on 8uug_A_1_B

Protein Model on 8uug_A_1_B_1 (TEMPLATE: 8uug )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(R1A_SARS2)	A 1 (A)	polymer(polypeptide(L)) [312 aa]	Papain-like protease nsp3 :R1AB_SARS2
2	b		B 1 (A)	non-polymer(XXW)	N-[(1R)-1-{(3M,5M)-3-[1-(difluoromethyl)-1H-pyrazol-4-yl]-5-[1-(methoxymethyl)-1H-pyrazol-4-yl]phenyl}ethyl]-5-[2-(dimethylamino)ethoxy]-2-methylbenzamide	1725L 1726G 1727D 1730E 1771M 1810P 1811P 1827Y 1829G 1830N 1831Y 1832Q 1836Y 1864T (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8uug_A_1 identity=100.0%

queryA      1567:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS:1666
                :****************************************************************************************************:
8uug_A_1       7:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 106
SecStr          : EEEEEESSSSS EEEEE TTS HHHHTSSEEETTEE SS    SSSSS EEEE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHTTS   EETTEE :    
ExpBur          :eeebebbbbeeeeeeeebeeeeebeeebeebbbebeebeeebbeeebeeeebbbeeeeeebeebbeebbeeeeeebbeebbebbeebeebebeebeebbb:    

queryA      1667:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE:1766
                :****************************************************************************************************:
8uug_A_1     107:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 206
SecStr          :    SSTHHHHHHHHHHTTS   BSSHHHHHHHHHHHHT  HHHHHHHHHHTT  TT    HHHHHHHHHTTB  TT EEEEEEEETTTEEEEEEEEGGG:    
ExpBur          :beeeeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbebbbbbbbbbeeeeeeebebeebbeebbeebebeebebbbbeebeeeeeeeeeeebee:    
Contact         :                                                          bbb  b                                    

queryA      1767:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV:1866
                :****************************************************************************************************:
8uug_A_1     207:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV: 306
SecStr          :GTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEEETTEEEEEEEEESSSEEEEETTEEEEES EEEEEEEE:    
ExpBur          :bbbbeebbbbeebbebbeeeeeeeeebeebbbebebebbbbbbeeeeeebeeeebbbbbbbeeeeeeeebebbbbeebbbbbebeeeeeeeebebebbbb:    
Contact         :    b                                      bb               b bbbb   b                           b  

queryA      1867:FYKENSYTTTIK:1878
                :************:
8uug_A_1     307:FYKENSYTTTIK: 318
SecStr          :EEE SEEE    :    
ExpBur          :bbebeeeebeee:

Protein Model on 8uug_A_1_B_1 (TEMPLATE: 8uug )

Input Residue Numbers for Focused Sites