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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | A 1 (A) | polymer(polypeptide(L)) [311 aa] | Papain-like protease nsp3 :R1A_SARS2 | |
2 | b | B 1 (A) | non-polymer(XB5) | 5-[2-(dimethylamino)ethoxy]-N-{(1R)-1-[(3M,5P)-3-(1-ethyl-1H-pyrazol-3-yl)-5-(1-methyl-1H-pyrazol-4-yl)phenyl]ethyl}-2-methylbenzamide | 1725L 1726G 1727D 1730E 1771M 1810P 1811P 1827Y 1829G 1831Y 1832Q 1836Y 1864T (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8uob_A_1 identity=100.0% |
queryA 1567:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS:1666 :****************************************************************************************************: 8uob_A_1 7:TIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTS: 106 SecStr : EEEEEESSSSS EEEEE SSS HHHHTSSEEETTEE SS TTTTT EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS EETTEE : ExpBur :eeebebbbbeeeeeeeebeeeebbeeebeebbbebeebbeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbeebbebbeebeebebeebeebbb: queryA 1667:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE:1766 :****************************************************************************************************: 8uob_A_1 107:IKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVE: 206 SecStr : SSTHHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHTT TT HHHHHHHHHTTB TT EEEEEEEETTTEEEEEEEETHH: ExpBur :beebeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbebbbbbbbbbeeeeeeeeebeebbeebbeebebeebebbbbbebeeeeeeeeeeeebe: Contact : bbb b queryA 1767:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV:1866 :****************************************************************************************************: 8uob_A_1 207:AVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDV: 306 SecStr :HHEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEEEESSSSEEEEEEEESSSEEEEETTEEEEESSEEEEEEEE: ExpBur :bbbbeebbebeebbebbeeebeeeeebeebbbebebebbbbbbeeeeeebeeeebbbbbbbeeeeeeeebebbbbeebbbbbebeeeeeeeebebebbbb: Contact : b bb b b bb b b queryA 1867:FYKENSYTTTI:1877 :***********: 8uob_A_1 307:FYKENSYTTTI: 317 SecStr :EEE SEEE : ExpBur :bbebeebebee: |