Protein Model on 8eua_A_1_E_1 (TEMPLATE: 8eua )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(R1A_SARS2) A 1 (A) polymer(polypeptide(L)) [311 aa] Papain-like protease nsp3 :R1AB_SARS2
2 b E 1 (A) non-polymer(ZN) ZINC ION 1636H (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8eua_A_1 identity=100.0%
queryA      1566:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT:1665
                :****************************************************************************************************:
8eua_A_1       5:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT: 104
SecStr          : EEEEEEESSSSS EEEEEESSS HHHHTSSEEETTEE TTS   GGGTT EEEE   SHHHHHHHHHHHS   TTHHHHHHHHHHHHTTS   BSSSSB:    
ExpBur          :eebebebbbbeeeeeeeebebeebbeeebeebbbebeebeeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebb:    
Contact         :                                                                      b                             

queryA      1666:SIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV:1765
                :****************************************************************************************************:
8eua_A_1     105:SIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV: 204
SecStr          :   S TT HHHHHHHHHTTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHHT  TT    HHHHHHHHHHTB  TT EEEEEEEETTTEEE  EEETH:    
ExpBur          :bbeebeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbebbbbbbbbbebebeeeeebeebbbebbeebebeebebbbbbebeeeeeeeeeeeeb:    

queryA      1766:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD:1865
                :****************************************************************************************************:
8eua_A_1     205:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD: 304
SecStr          :HHHEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEESSTTS EEEEEEESSSEEEEETTEEEEESEEEEEEEE:    
ExpBur          :ebbbbeebbbbeebbebbebebeeeeebebebbbbebebbbbbbeeeeeebeeeebbbbbbbeeeeeeeebebbbbeebbbbbebeeeeeeeebebebbb:    

queryA      1866:VFYKENSYTTT:1876
                :***********:
8eua_A_1     305:VFYKENSYTTT: 315
SecStr          :EEEE S B   :    
ExpBur          :bbbeeeebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123