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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(R1A_SARS2) | A 1 (A) | polymer(polypeptide(L)) [311 aa] | Papain-like protease nsp3 :R1AB_SARS2 | |
2 | b | B 1 (A) | non-polymer(WUK) | methyl 4-{2-[3-(2-{[(1R)-1-(naphthalen-1-yl)ethyl]carbamoyl}phenyl)propanoyl]hydrazinyl}-4-oxobutanoate | 1669W 1672N 1673N 1674C 1675Y 1725L 1726G 1727D 1730E 1810P 1811P 1827Y 1831Y 1832Q 1833C 1834G 1835H 1836Y (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8eua_A_1 identity=100.0% |
queryA 1566:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT:1665 :****************************************************************************************************: 8eua_A_1 5:RTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLT: 104 SecStr : EEEEEEESSSSS EEEEEESSS HHHHTSSEEETTEE TTS GGGTT EEEE SHHHHHHHHHHHS TTHHHHHHHHHHHHTTS BSSSSB: ExpBur :eebebebbbbeeeeeeeebebeebbeeebeebbbebeebeeeebeeebeeeebbbeeeeeebeebbeebbeeeeeebbbebbebbeebeebebeebeebb: queryA 1666:SIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV:1765 :****************************************************************************************************: 8eua_A_1 105:SIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGV: 204 SecStr : S TT HHHHHHHHHTTTS BSSHHHHHHHHHHHTT HHHHHHHHHHHT TT HHHHHHHHHHTB TT EEEEEEEETTTEEE EEETH: ExpBur :bbeebeebbbbbbbbbbbbbbebebebebbbebbeebeeeebbebbbbbbbbbebebeeeeebeebbbebbeebebeebebbbbbebeeeeeeeeeeeeb: Contact : b bbbb bbb b queryA 1766:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD:1865 :****************************************************************************************************: 8eua_A_1 205:EAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITD: 304 SecStr :HHHEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEESSTTS EEEEEEESSSEEEEETTEEEEESEEEEEEEE: ExpBur :ebbbbeebbbbeebbebbebebeeeeebebebbbbebebbbbbbeeeeeebeeeebbbbbbbeeeeeeeebebbbbeebbbbbebeeeeeeeebebebbb: Contact : bb b bbbbbb queryA 1866:VFYKENSYTTT:1876 :***********: 8eua_A_1 305:VFYKENSYTTT: 315 SecStr :EEEE S B : ExpBur :bbbeeeebeee: |