Protein Model on 8cx9_A_1_M_1 (TEMPLATE: 8cx9 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(R1A_SARS2) A 1 (B) polymer(polypeptide(L)) [314 aa] Papain-like protease nsp3 :R1A_SARS2
2 b M 1 (B) non-polymer(ZN) ZINC ION 1752C 1755C 1787C 1789C (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8cx9_A_1 identity=100.0%
queryA      1565:VRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGL:1664
                :****************************************************************************************************:
8cx9_A_1       7:VRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGL: 106
SecStr          :  EEEEEEESSSSS EEEEEESSS HHHHTSSEEETTEE TTS   GGGTT EEEE   SHHHHHHHHHHH    TTSHHHHHHHHHHHTTS   EETTE:    
ExpBur          :eeebebebbbbeeeeeeeebeeeeebeeebeebbeebeebeeebbeeebeebebbbbbeeeebeebbeebbebeeeebbbbbbebbeebeebebeebeeb:    

queryA      1665:TSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG:1764
                :****************************************************************************************************:
8cx9_A_1     107:TSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG: 206
SecStr          :E     SS HHHHHHHHHHTTS   BSSHHHHHHHHHHTTT  HHHHHHHHHHTT  TT    HHHHHHHHHHTB  SS EEEEEEEETTTEEEEEEEES:    
ExpBur          :bbbeebeebbbbbbbbbbbebbebebebebbeebbeebeeeebbebbbbbbbbbeeeeeeeebbeebbeebbeebebeebebbbbbebeeeeeeeeeeeb:    
Contact         :                                                                                       b  b         

queryA      1765:VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPIT:1864
                :****************************************************************************************************:
8cx9_A_1     207:VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPIT: 306
SecStr          :GGGTEEES S HHHHHH EEEE SSSSEEEEEEEEEESSEEEEEEEEEEEEE TTS SEEEEE SBTTB  EEEEEESSSEEEE SS EEE S EEEEEE:    
ExpBur          :bebbbbeebbbbeebbebbeeebeeeeebeebbbbbebebbbbbbeeeeeebbeeebbbbbbeeeeeeeeebebbbbeebbbbbebeeeeeeeebebbbb:    
Contact         :                      b b                                                                           

queryA      1865:DVFYKENSYTTTIK:1878
                :**************:
8cx9_A_1     307:DVFYKENSYTTTIK: 320
SecStr          :EEEEE S EE    :    
ExpBur          :bbbbebeeeebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123