[pdbjlvh2]Protein Model on 8qy5_A_1_J

Protein Model on 8qy5_A_1_J_1 (TEMPLATE: 8qy5 )

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[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IL6RA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [584 aa]	Interleukin-6 receptor subunit beta :IL6RB_MOUSE
2	b		J 1 (J)	branched(oligosaccharide)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	118Q(N) 120S(T) 133E(Q) 302E(Y) (identity: 0.0 %/26.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8qy5_A_1 identity=26.1%

queryA       106:VHLLVDVPPEEP-QLSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYI---VSMCVASSVGSK: 201
                :*  *   **  *  * *       *  * * *     * *   *          *   *     *     **           *    *        *  :
8qy5_A_1     118:VTMLSGFPPDKPTNLTCIVNEG-KNMLCQWDPGRETYLETNYTL--------KSEWATEKFPDCQSKHGTSCMVSYM---PTYYVNIEVWVEAENALGKV: 205
SecStr          :EEEEEE      EEEEEEEETT-S  EEEEE  S  SS  EEEE--------EEE SSSB   EE SSSSEEE SS ---  TTS EEEEEEEEETTEEE:    
ExpBur          :bebebbbebeebeebebbbbbe-eebebebeeeeebebebebbb--------ebeeeeeebeebebeebeebebebe---beeeeebebbbbbebeeeee:    
Contact         :             b b            b                                                                       

queryA       202:FSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDL---QHHCVIHDAWSGLRHVVQLRAQEEF: 298
                : *    *       * ** *  **        *   *    *       *     **     *       *           *       *   *     :
8qy5_A_1     206:SSESINFDPVDKVKPTPPYNLSVTNSEELSSILKLSWVS--SGLGGLLDLKSDIQYRTKDASTWIQVPLEDTMSPRTSFTVQDLKPFTEYVFRIRSIKDS: 303
SecStr          :E   EEE GGGGEE    EEEEEEE SS TTEEEEEEE -- HHHHTS EEEEEEEEETT    EE  TTGGGSS SEEEEES  TT EEEEEEEEEETT:    
ExpBur          :ebeeeebbbbeebebeebeebebeeeeeebbbbebebeb--ebeeeebebbbbbbbbeeeeeeeeebeeeebeeeeeeeebeebeeebebbbebebbbee:    

queryA       299:GQGEWSEWSPEAMGTPWTESRSPP: 322
                :* * ** ** ** **      * *:
8qy5_A_1     304:GKGYWSDWSEEASGTTYEDRPSRP: 327
SecStr          :  S        EEEE      SS :    
ExpBur          :eeeeebeebeebebebbbeebeee:    
Contact         :   b

Protein Model on 8qy5_A_1_J_1 (TEMPLATE: 8qy5 )

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