Protein Model on 8qy4_E_1_D_1 (TEMPLATE: 8qy4 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RA_HUMAN) E 1 (B) polymer(polypeptide(L)) [197 aa] Interleukin-11 receptor subunit alpha :I11RA_HUMAN
2 b D 1 (F) polymer(polypeptide(L)) [583 aa] Interleukin-6 receptor subunit beta :IL6RB_MOUSE 116E(R) 189I(R) 203S(T) 204K(R) 205T(L) 207T(D) (identity: 0.0 %/30.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8qy4_E_1 identity=30.3%
queryA       113:PPEEPQLSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRK---FQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDS--SFYIVSMCVASSVGSKFSKTQT: 207
                :**  *  **       *  * * *     * *      **                              *  *    * *          *        :
8qy4_E_1     112:PPARPVVSC-QAADYENFSCTWSPSQISGLPTRYLTSYRKKTVLXXXXXXXXXSTGPWPCPQDPLGAARCVVHGAEFWSQYRINVTEVNPLGAS-TRLLD: 209
SecStr          :     EEEE-EBSSSSEEEEEEE SS  SS  EEEEEEEE    ---------  S EE  B TT  SEEEEET  TTS EEEEEEEESTT  E-EEEEE:    
ExpBur          :ebeebebeb-ebebbeebbbebeeeeebeeeeeeebbbeebeee---------eeeeeebeebeeeeeebbbeebebebebebebbbebeeeeb-eeeee:    
Contact         :   b                                                                             b             bbb b

queryA       208:FQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSS-FYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEW: 306
                :     ** ****    *  *   ** *   *  * **       * * * **        *     *    ** **  ** * *   *      * ** *:
8qy4_E_1     210:VSLQSILRPDPPQGLRVESVPGYPRRLRASWTYPASWPCQPHFLLKFRLQYRPAQHPAWSTVEPAGLEE--VITDAVAGLPHAVRVSARDFLDAGTWSTW: 307
SecStr          :E HHHHB     EEEEEEE TT TT EEEEEE  TTS   TTS EEEEEEEEESS    EEE  STTEE--EETT  TT  EEEEEEEEETT  S     :    
ExpBur          :bbbeeebebeebeebebeebeeeeeebebbbebbeebeeeeebebebebbbebeeeeeeeeeebeeeee--ebeebeeeeebbbebbbebeeebbebbee:    

queryA       307:SPEAMGTP: 314
                :**** ***:
8qy4_E_1     308:SPEAWGTP: 315
SecStr          :   EEE  :    
ExpBur          :beebebeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123