[pdbjlvh2]Protein Model on 8qy4_B_1_Q

Protein Model on 8qy4_B_1_Q_1 (TEMPLATE: 8qy4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IL6RA_HUMAN)	B 1 (C)	polymer(polypeptide(L)) [583 aa]	Interleukin-6 receptor subunit beta :IL6RB_MOUSE
2	b		Q 1 (C)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	220A(Y) 221N 239Q(V) (identity: 33.3 %/26.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8qy4_B_1 identity=26.1%

queryA       106:VHLLVDVPPEEP-QLSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYI---VSMCVASSVGSK: 201
                :*  *   **  *  * *       *  * * *     * *   *          *   *     *     **           *    *        *  :
8qy4_B_1     118:VTMLSGFPPDKPTNLTCIVNEG-KNMLCQWDPGRETYLETNYTL--------KSEWATEKFPDCQSKHGTSCMVSYM---PTYYVNIEVWVEAENALGKV: 205
SecStr          :EEEEEE      EEEEEEEETT-S  EEEEE  S  SS    EE--------EEEETTEE   EE SSSSEEE SS ---  TTS EEEEEEEEETTEEE:    
ExpBur          :bebebbbebeebeebebebebe-eebebebeeeeebebebebbb--------ebeeeeeebeebebeebeebebebe---beeeeebebbbebebeeeee:    

queryA       202:FSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDL---QHHCVIHDAWSGLRHVVQLRAQEEF: 298
                : *    *       * ** *  **        *   *    *       *     **     *       *           *       *   *     :
8qy4_B_1     206:SSESINFDPVDKVKPTPPYNLSVTNSEELSSILKLSWVS--SGLGGLLDLKSDIQYRTKDASTWIQVPLEDTMSPRTSFTVQDLKPFTEYVFRIRSIKDS: 303
SecStr          :E   EEE GGGGEE    EEEEEEE SS TT EEEEEE -- HHHHTS EEEEEEEEESS  S EE  GGGG S  SEEEE S  TT EEEEEEEEEETT:    
ExpBur          :ebeeeebbbbbebebeebeebebeeeeeebebbebebee--ebeeeebebbbbbbbbeeeeeeeeebeeeebeeeeeebebeebeebeebbbebebbbee:    
Contact         :                  bb                 b                                                              

queryA       299:GQGEWSEWSPEAMGTPWTESRSPP: 322
                :* * ** ** ** **      * *:
8qy4_B_1     304:GKGYWSDWSEEASGTTYEDRPSRP: 327
SecStr          :  S        EEEE      SS :    
ExpBur          :eeeeebeebeebebebbbeebeee:

Protein Model on 8qy4_B_1_Q_1 (TEMPLATE: 8qy4 )

Input Residue Numbers for Focused Sites