[pdbjlvh2]Protein Model on 8d7e_A_1_H

Protein Model on 8d7e_A_1_H_1 (TEMPLATE: 8d7e )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IL6RA_HUMAN)	A 1 (C)	polymer(polypeptide(L)) [282 aa]	Ciliary neurotrophic factor receptor subunit alpha :CNTFR_HUMAN
2	b		H 1 (H)	branched(oligosaccharide)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	89H(G) 91S (identity: 50.0 %/33.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8d7e_A_1 identity=33.9%

queryA        78:GRRLLLRSVQLHDSGNYSCYR--AGRPAGTVHLLVDVPPEEPQLSCFRKSPLSNVVCEWG---PRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQ: 172
                :*  * *    *  ** * *           * * *  ** ** ***          * *    *   *      **   *            *       :
8d7e_A_1      49:GSQLVLHGLELGHSGLYACFHRDSWHLRHQVLLHVGLPPREPVLSCRSNTYPKGFYCSWHLPTPTYIPNTFNVTVLHGSKIM---------VCE-KDPAL: 138
SecStr          :TTEEEE S  TTS EEEEEEETTS  EEEEEEEEEE      EEEEEBS SSS  EEEEE SS  SS  EEEEEEEETTEE ---------   -   SS:    
ExpBur          :ebebebeebeeeeeeebbbbeeebeeeebbbebebbeebeebebebebbbbeebbbbebebeeebebeeeeeeebebeeeeb---------ebe-eeeee:    
Contact         :           b b                                                                                      

queryA       173:KFSCQLAVPEGDSSF-YIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSW-NSSFYRLRFELRYRAERSKTFTTWMV: 270
                :*  *        *   * **  *    *       **    *  **** *     *  *** * **** *  *       * * ****            :
8d7e_A_1     139:KNRCHIRYMHLFSTIKYKVSISVSNALGHNATAI-TFDEFTIVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL: 237
SecStr          :SS        SS    EEEEEEEE SS EEEEEE-EE SSTTB     S  EEE  SS SS  EEE    TT S  SSS EE EEEEEESSS     EE :    
ExpBur          :eeebebebeeeeeeeebebebebebeeeeeeeee-ebebeebbebeebeebebeebeeeeeebebebeebeebeeeeeeebbbbbbbbbeeeeeeeeeeb:    

queryA       271:KDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPWTE: 317
                : *   *    **  *     *  *      * ** **  *  *****:
8d7e_A_1     238:SDGTAHTIT-DAYAGKEYIIQVAAKDN-EIGTWSDWSVAAHATPWTE: 282
SecStr          : SSSEEE  -S  SSS EEEEE  EES-SSS      S         :    
ExpBur          :eeeeebebe-ebeeeeebebbbbbbbe-ebeeebeebeebebebeee:

Protein Model on 8d7e_A_1_H_1 (TEMPLATE: 8d7e )

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