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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IL6RA_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [294 aa] | Interleukin-12 subunit beta :IL12B_HUMAN | |
2 | b | R 1 (R) | polymer(polypeptide(L)) [208 aa] | Briakinumab FAb Heavy chain | 106V(T) 107H(D) 110V(K) 200S(K) (identity: 0.0 %/27.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5njd_C_1 identity=27.0% |
queryA 39:PGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAG--------------TVHLLVD--VPPEEPQLSCF: 122 :** * *** ** * * * * * * * * * * * * * * * * : 5njd_C_1 42:PGEMVVLTCDT--PEEDG-ITWTL------DQSSEVLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCE: 132 SecStr : EEEEEE S--S SS- EEEE------TT EESSEEEEEE SGGG EEEEEEETTEEEEEEEEEEEEEETTEE SB SSSTT EEE: ExpBur :eeeebebebee--eeeee-bebbb------eeeeeeeeeeeebebebeeeeebbebbbbbeeeeebebebbbbbeeeeeebeebbeeeeeeeeebbbbbe: Contact : bb bb b queryA 123:RKSPLSNVVCEW----------------GPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQ: 206 : * * * * * * * ** * * * * * * * * * * : 5njd_C_1 133:AKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERVRGDNKEY----EYSVECQEDS---ACPAAEESLPIEVMVDAVHKLKYENYTS: 225 SecStr :BSSSSSEEEEEEEES SSEEEEEEEEE SSS EEEE EEEEEEESSSSEEE----EEEEEEEESS--- TTS S EEEEEEEEETTEEEEEEE: ExpBur :bebbebebebebbbebeeebebebebbbbeeeeeebebeeeeeeeeeeeeeeebb----bbebebebee---eeeeeebeeebebebbbbbeebbbebee: Contact : b queryA 207:TFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNS--SFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWS: 304 : * * **** * * * * * * * * * ** *** **: 5njd_C_1 226:SFFIRDIIKPDPPKNLQLKPLXXXXQ-VEVSWEYPDTWSTPHSYFSLTFCVQVQGXXXXXXXXRVFTDKTSATVI----CRKNASISVRAQDRYYSSSWS: 320 SecStr :EE HHHHB EEEEEEE ---- -EEEEEE TTS S TTTS EEEEEEEE -------- EEESSSEEEE ---- TT EEEEEEEESSS : ExpBur :ebebeebbebeebeebeeeee----e-bbbebebbeebbeeeeebbbbbbbeeee--------eeebeeeebebe----beeebebbbbbbbeeeebeeb: queryA 305:EWS: 307 :** : 5njd_C_1 321:EWA: 323 SecStr : E: ExpBur :eeb: |