[pdbjlvh2]Protein Model on 4grw_B_1_G

Protein Model on 4grw_B_1_G_1 (TEMPLATE: 4grw )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IL6RA_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [293 aa]	Interleukin-12 subunit beta :IL12B_HUMAN
2	b		G 1 (G)	polymer(polypeptide(L)) [125 aa]	Nanobody 124C4	126P(Y) 127L(S) 129N(R) 172Q 181P 220A(K) 239Q(E) 242H(D) 243S(T) 244W 245N(S) 246S(T) 249Y(F) (identity: 23.1 %/27.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4grw_B_1 identity=27.8%

queryA        39:PGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAG--------------TVHLLVD--VPPEEPQLSCF: 122
                :**  * ***    **      * *         *   * *  *        * * * *   *                      * *   *     * * :
4grw_B_1      42:PGEMVVLTCDT--PEEDG-ITWTL------DQSSEVLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCE: 132
SecStr          :  EEEEEE  S--S  SS- EEEE------TT     EESSEEEEEE SGGG EEEEEEETTEEEEEEEEEEEEEETTEE   SS    SSSSS   EEE:    
ExpBur          :eeeebebebeb--eeeee-bebbb------eeeeeeeeeeeebebebeeeeebbebbbeeeeeeebebebbbbeeeeeeebeebbeebeeeeeebbbebe:    

queryA       123:RKSPLSNVVCEW----------------GPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQ: 206
                : *       * *                *       *  *  *                 ** * *  *   * *    *  *  *  *         * :
4grw_B_1     133:AKNYSGRFTCWWLTTISTDLTFSVKSSRGXXXPQGVTCGAATLSAERVRXXNKEY----EYSVECQEDS---ACPAAEESLPIEVMVDAVHKLKYENYTS: 225
SecStr          :BSSSSSEEEEEEEES  SSEEEEEEEEE ---   EEE   EEEEEE  --  EE----EEEEEEEETT---  TTS   S EEEEEEEEETTEEEEEEE:    
ExpBur          :bebbebebebbbbbebeeebebebebbbe---eebbebeeeeeeeeeee--eebe----bbbbebebee---eeeeeebeeebebebbbbeeeebbebee:    
Contact         :   bb b                                                          b        b                         

queryA       207:TFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNS--SFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWS: 304
                : *    *  **** *        * *   * *  *  *    *   * *                  *     **             ***       **:
4grw_B_1     226:SFFIRDIIKPDPPKNLQLKPL-KNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGXXXXXXXDRVFTDKTSATVI----CRKNASISVRAQDRYYSSSWS: 320
SecStr          :EE GGGSB     EEEEEEE -SSTTEEEEEEE  TTS S TTTS EEEEEEEE ------- EEEESSSEEEEE----  TT EEEEEEEESSS     :    
ExpBur          :ebebeebbebeebeebeeeee-eeeeebebbbebbeebbeeeeebbbbbbbbbee-------eeeebeeebbebe----beeebebbbebbbeeeebeeb:    
Contact         :             b                  b  bbbbbbb  b                                                       

queryA       305:EWS: 307
                :** :
4grw_B_1     321:EWA: 323
SecStr          :  E:    
ExpBur          :eeb:

Protein Model on 4grw_B_1_G_1 (TEMPLATE: 4grw )

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